| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2786 |
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| Symbol | |
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| ID | 5695643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3360683 |
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| End bp | 3362056 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265400 |
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| Product | UDP-N-acetylmuramate--alanine ligase |
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| Protein accession | YP_001530666 |
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| Protein GI | 158522796 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTAA AAGCATACCA TATCTATTTT GTGGGCATCG GCGGCATCGG TATGAGCGGC
ATTGCCGAGC TGCTGCTCAA CCTGGGATAC ACCGTGTCCG GGTCCGATAT CCGGCAGTCG
GACATTACCG ACCGGCTGAC CGGCCTGGGC GGGAAAATAT TTTACGGCCA TGACGGCAAA
AACATTGGCG GCGCCGATGT GGTGGTGGTG TCATCCGCCA TCGCCGCCGA CAACCCGGAG
GTGGCGGCGG CCCGGGAGGC GGGGATTCCC GTGATTCCCA GGGCCGAGAT GCTGGCCGAG
ATCCTGCGGC TCAAGTACAG TATCGTGATC GCCGGGGCCC ACGGCAAGAC CTCCACCACC
TCCATGGTGG CGTCGGTGCT GGGCCAGGGC GGCATGGATC CCACGGTGGT GATCGGCGGC
AAGCTCAAGA GCATCGGCAC CAACGCGGTG CTGGGCCATG GTGACTACAT TGTGGCCGAG
GCCGACGAGA GCGACGGGTC ATTTCTGAAG TTTTCCCCCT CCATTGCCGT GGTGACCAAT
ATCGACCGGG AACACCTGGA TTTTTACCCG GATCTCGCAG CCATATCAAA AAGTTTTCTG
GAATTTCTCG ACCGGATTCC CTTTTACGGA GTGGCCGTGG TCTGCCTGGA CAACGAACCG
CTCCAGGCCC TGGTGCCCCT GATCAAGAAG CGGTTCATCA CTTACGGCAC CAGCAACCAG
GCCGACCTTC AGGCCCGCCA TATCACGCCC ATCAACGGCA AGGTCCGATT TTCCGTTGTC
TGGCGCCAGG AAGAGCTTGG CACCATCGAC CTGGGCGTGC CGGGGTTCCA TAACGTGCGA
AACGCCCTGG CCGCCGTGGC CGTGGGTCTG GAGCTGGGCC TTGCGTTTGC CGTGATCAAG
GAAGCCCTGG AAACCATGGC CGGCGTGCAG CGGCGGCTTG AGAAAAAGGG CGAGACAGGC
GGCGTCATCG TGGTGGACGA CTACGGCCAT CATCCCACGG AAATCAAGGC CACCCTTCAG
GGGGTGCGGC AGCACTGGGA AGACCGGCGG GTGGTGGTGG TGTTCCAGCC CCATCGGTAT
AGCCGGACAA AGGCCCTGTT TGATGACTTT ACCCGGGCCT TCTACCAGTG CGACGAACTG
GTGGTGCTGC CCATCTACGC GGCCGGCGAA CATCCCATCG ACGGGGTGGA CGGCGAGTCC
GTGGCCGAAG GCATCCGCGC CCACGGGCAC AAGGGCGTGC GGTATGTGGA GGGACGGGCC
GAGGCCGTGG CATACCTGAA AGAGATACTG CAGAAGGGCG ACATCCTGTT GACCCTGGGC
GCCGGGGATG TGTGGCGCAT CGGCGAGGAT GTGCTGTCCG GGCAGGAAAG ATAG
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| Protein sequence | MYLKAYHIYF VGIGGIGMSG IAELLLNLGY TVSGSDIRQS DITDRLTGLG GKIFYGHDGK
NIGGADVVVV SSAIAADNPE VAAAREAGIP VIPRAEMLAE ILRLKYSIVI AGAHGKTSTT
SMVASVLGQG GMDPTVVIGG KLKSIGTNAV LGHGDYIVAE ADESDGSFLK FSPSIAVVTN
IDREHLDFYP DLAAISKSFL EFLDRIPFYG VAVVCLDNEP LQALVPLIKK RFITYGTSNQ
ADLQARHITP INGKVRFSVV WRQEELGTID LGVPGFHNVR NALAAVAVGL ELGLAFAVIK
EALETMAGVQ RRLEKKGETG GVIVVDDYGH HPTEIKATLQ GVRQHWEDRR VVVVFQPHRY
SRTKALFDDF TRAFYQCDEL VVLPIYAAGE HPIDGVDGES VAEGIRAHGH KGVRYVEGRA
EAVAYLKEIL QKGDILLTLG AGDVWRIGED VLSGQER
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