Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2685 |
Symbol | |
ID | 5695536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3228750 |
End bp | 3229913 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641265293 |
Product | TraB family protein |
Protein accession | YP_001530565 |
Protein GI | 158522695 |
COG category | [S] Function unknown |
COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGTG ACGACAACAT TCATCACCTG CATGCAGGTG ACAAAGAGAT CCTTCTGGTG GGCACCGCCC ATGTCTCCCG CCAGAGCGCC GAACAGGTCA CTCAGGTGAT TGAGGCAGAG CAGCCGGACA CGGTGTGCGT GGAGCTTTGC CGGCCCAGGT TTGAGGCTGT CCGCAACCGG GAGCACTGGC GACAGATGGA CATCCTGAAG GTGGTCCGGG ACAAGAAGGC CTTTATGCTG CTGGCCAACC TGCTGCTGGC CGCCTTTCAG AAAAAGATCG CGGAAAAGTT CGGCATTGCG CCGGGCCAGG ACATGATCAG TGCTATTGAA ACCGCGGAAA AAATCGGGGC AAAGATCCAC CTGGCCGACC GGGAAATCCG CGCCACCCTT GCCCGGGCCT GGCGTTCCAT GGGGCTCTGG GGAAAAAGCA AGCTCCTGTT CCAACTGGTG GGCTCCCTTG CAGGTGCCGA TGAAATCTCT GAAGAGGAGA TCGAAAAGCT CAAGCAGGAG GACATGCTGC ACATGGTGCT GGCCGAGCTG GAGGCATCCC ACCCCATGCT GCGAAAAATC ATCATCGATG AACGGGACCA GTACCTGGCC CACTCCATTT ACAACGCCCC CGGAAAAAAG ATCGTGGCTG TGGTGGGTGC GGGCCATGTA GCCGGCATCA AACGGTACTG GAACACGGCC ATCGATATTC AGGCGCTGGA GACCGTTCCA CCGCCCGGTA TATCCGGGAA AGTGATAAAG TGGGGTATTC CCGCCCTTAT CATCGCGGTG TTTGTGCTGG GGTTTGCCCT GGGCGGCAGG GATACCGGCA TGCACCTTCT GGGGCTCTGG ATTCTTGCCA ACAGCACCCT GGCCGGCCTG GGCGCCCTGG CCGCATGGGG CCATCCGCTC ACCATCCTGG CGGCCGCGGT ATCGGCCCCC ATCACATCGG TCAACCCCGC CATTGGCGCC GGATGGGTGG CCGGGCTGGT GGAAGCCCTG GTGCGGCGGC CCACCGTGGG AGACCTGGAA GACCTCTCTT CCGATATCAC CTCCTTTGGC GGTTTCTGGC GCAACCGGGT CACCCGGGTG CTGCTGGTTG TGGTGCTGGT CAATCTGGGC AGCACGCTGG GCACCTTTGG TGCCCTGCCC CTGATGGCCC GGCTGTTCCA CTGA
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Protein sequence | MTSDDNIHHL HAGDKEILLV GTAHVSRQSA EQVTQVIEAE QPDTVCVELC RPRFEAVRNR EHWRQMDILK VVRDKKAFML LANLLLAAFQ KKIAEKFGIA PGQDMISAIE TAEKIGAKIH LADREIRATL ARAWRSMGLW GKSKLLFQLV GSLAGADEIS EEEIEKLKQE DMLHMVLAEL EASHPMLRKI IIDERDQYLA HSIYNAPGKK IVAVVGAGHV AGIKRYWNTA IDIQALETVP PPGISGKVIK WGIPALIIAV FVLGFALGGR DTGMHLLGLW ILANSTLAGL GALAAWGHPL TILAAAVSAP ITSVNPAIGA GWVAGLVEAL VRRPTVGDLE DLSSDITSFG GFWRNRVTRV LLVVVLVNLG STLGTFGALP LMARLFH
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