Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2608 |
Symbol | |
ID | 5695459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3150666 |
End bp | 3151655 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641265216 |
Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
Protein accession | YP_001530488 |
Protein GI | 158522618 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.336008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAG TGGTCACAGG CGGGGGCGGG TTTCTGGCCG GGCACCTGAT AGACAAGCTG GTAGAAGCCG GACATTCTGT CAGGACGGTT GAGCTTCCGG GGCGGAACGT TCAACGGCTG AAAGATCTGG ATGTGGAGAT TGTTACCGGG GATCTATGTG ATCCGAGCCT TGCCGCGCGG GCCTGCGAGG GTATGGACGT GGTCTTTAAT CCCGCCGCCC TGGCCGCGCC CCTCGGTCCA TGGAAACGGT TCTGGTCGAT CAACGTTGAA CTTGTCGACA ATGTAATAGC GGGGTGTAAA AAGTCGGGCG TCCGTCGCCT GGTGCATGTC AGTTCCCCCT CTGCTGTTTT TGACGGCAGC GACCACTTTG ACGCTGATGA AACGCTTCCC TTTCCAAAAA AGTTTTTAAA CTACTACTGC GCGACCAAGG CGGAGAGCGA AAAGCGCGTC CTGGCGGCCA ATGGCACAGA CCTTGAAACC GTTGCGATCC GGCCACACGC GATCTGGGGG CCAAGAGACC GCACCCTGTT TCCGCGCATT ATCGAGCGGG CCAAATCACG CCGTCTCGTT CAGGTAGGAG ACGGAACCAA TATCATCAGC ACCCTTTATG TGGAGAACGG TGCCGATGCC CTGATCCTGG CGGCCACCGC GGATAGAGCA CCGGGTAACG TCTATTTTGT GACGGACAAC GACACGGTTA ACCTGTGGGG CTTTTTAAGA CGCATACTGA ACGACCTGGG TTTGCCACCG ATCAGGGCCA GGATCCCTTA CCCGCTTGCT TATACACTTG GCGCCACTCA GGAGGTATTA TGGACGGTTC TGAAGTTGTC CGGCGAGCCG ACCATTACCC GCTATTCCGC TGCCGAACTC GCTAAAAATC ACAGCTATTC CATAGATCGC GCCCGTACTG ATTTGGGTTA TGAGCCAACG GTTTCGCGGG AAGAGGGTCT ACAACGTTTT TATGAGTGGG TCAGGAACAA CCTGCTTTGA
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Protein sequence | MKAVVTGGGG FLAGHLIDKL VEAGHSVRTV ELPGRNVQRL KDLDVEIVTG DLCDPSLAAR ACEGMDVVFN PAALAAPLGP WKRFWSINVE LVDNVIAGCK KSGVRRLVHV SSPSAVFDGS DHFDADETLP FPKKFLNYYC ATKAESEKRV LAANGTDLET VAIRPHAIWG PRDRTLFPRI IERAKSRRLV QVGDGTNIIS TLYVENGADA LILAATADRA PGNVYFVTDN DTVNLWGFLR RILNDLGLPP IRARIPYPLA YTLGATQEVL WTVLKLSGEP TITRYSAAEL AKNHSYSIDR ARTDLGYEPT VSREEGLQRF YEWVRNNLL
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