Gene Dole_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2506 
Symbol 
ID5695356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3035321 
End bp3036562 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content41% 
IMG OID641265114 
Productserine/threonine protein kinase 
Protein accessionYP_001530387 
Protein GI158522517 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000826348 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAA AACCAATAAC CTTCGACACA CCTTTTGACA CCTACACTTC TTCTGGCGTC 
ATTGGTGAGG GAGGCGCGGG GCGGGTGTAT ATTGTCAATA ATAGTGCTGG GAAAGAATAC
GCTCTAAAAT GCCTTGCCCC TGAGCGTATT AACACAGAAC GCCTAAAGCG ATTTAAAAAC
GAAATGCAGT ACTGCCAGCG TAACAATCAT CAAAATATCA TTAGATTAAT CGATACCGGC
GCAATATTCA TTAAAGATGT AAAATGTCCA TTCTATGTCA TGAGGAGGTA CTCCGGCACA
TTAAGAACGA TAATGGGAAA GCTGAAGACG GACGCAATAC TACCCTTGTT TTCACAAATA
TTGGATGGCA TTGAGGCTGC ACATCTTGCA GGAGTTTGGC ACAGAGACTT AAAACCAGAA
AACATCCTCT ATGACCAACG TAAAAATCGT TTGGTACTTG CAGATTTTGG AATCGCCCAC
TTTGAAGAAG AAGAAATCTA TACTGCTGTC GAAACAAGAA TAGCCAGTCG AATGGCAAAT
TTTCAATATT CTGCCCCTGA GCAAAGAACA AGAAGTGTAA AAATTGACAA TCGAGCCGAT
ATTTTCCCAC TTGGATTGAT CCTTAATGAA ATGTTTACAG GGGAAATATT GCAGGGTGCC
GGCTATAAAA AAATCTCTGA CACATCTGGT AACCATGCTT ATTTAGACGA CCTTGTTGAG
ATGATGACCC AGCAAAATCC AGCAAATCGT CCAGATTCGA TTGCAAAAAT CAAAATGGAA
CTTATTGGCC GGAGAAATGC TTTTGTTGCT TTGCAAAAAT ATGATGAATC AAAGAAACAA
GTTGTCAGTG CCGCTGAGCC TCCAGAATTT GAGCCGATCC AGATCGTAGG TCTTGATTAT
GAGTCTGGCA TCCTAAAACT ACAATTGAAC CGAAATGTAC CACCTGGGTG GGAGCAGGAA
TTCCAGAATC CTCGAGGAGG CCATCAGTTC ATTATAGGAT ATGGTCCTGA ACGATTTAAT
ATTCGTGGGG ACACAGCGTC AATTGGTATA CGTGATAATG AAAGTACTAT TCAAAAAGTA
GTTGACCATG CAAAAAATTA CGTGGCCGCA GCGAACCAAG GCTATATACA ACAGGAGAAG
CAAAGGGCAA GGCAAGAAAG TCAGCATAAA AGAGCTGAAC TTGAGAGACA AATCGTAGAA
TCAGAAAAAC GAAAAAATAT ACTTTCGAAT ATAAAATTAT AA
 
Protein sequence
MAKKPITFDT PFDTYTSSGV IGEGGAGRVY IVNNSAGKEY ALKCLAPERI NTERLKRFKN 
EMQYCQRNNH QNIIRLIDTG AIFIKDVKCP FYVMRRYSGT LRTIMGKLKT DAILPLFSQI
LDGIEAAHLA GVWHRDLKPE NILYDQRKNR LVLADFGIAH FEEEEIYTAV ETRIASRMAN
FQYSAPEQRT RSVKIDNRAD IFPLGLILNE MFTGEILQGA GYKKISDTSG NHAYLDDLVE
MMTQQNPANR PDSIAKIKME LIGRRNAFVA LQKYDESKKQ VVSAAEPPEF EPIQIVGLDY
ESGILKLQLN RNVPPGWEQE FQNPRGGHQF IIGYGPERFN IRGDTASIGI RDNESTIQKV
VDHAKNYVAA ANQGYIQQEK QRARQESQHK RAELERQIVE SEKRKNILSN IKL