| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2447 |
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| Symbol | |
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| ID | 5695296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2961314 |
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| End bp | 2962543 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641265054 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001530328 |
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| Protein GI | 158522458 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAA TCACGGCCCT GTCAAAAAAG GCGGTCGTCT TTGACTATAT GGGTGCCGCA
TCCTCTCTTG AAGGCCTTGA CGCCCGGATC GACCTGCTGC TGCACGACAG TGACACCTAT
ATCGACGACA TCGCCTGCCG CATCATTGAA GACCGGGTTA TAAAGAAGGA AGGCCCGCCG
GACGGCCGGT GCCTCAGGCG TTGCAGTGCC CGCTTTATTC AGCTCAACGC CGACCAGCAG
CGGAGACTCG CCCACCATGC GACCTGGAGC TCCAACCGGG AAGTTACCCG CCGGGAGCAT
CTGCGCCAGG AGATTGAGAA AAGCGAAGAA AAATACAAAA CCATTCTTGA AAACATCGAA
GAGGGGTATT TCGAGGTGGA TCTTGCCGGC CACATCACCT TCTTTAACAG CTCCATGCTG
AAAATGATCG GTTATACGGG AGGCGAACTG CTCGGCATGG GGTACCGCAG CTTTATGAGC
AGCAAGACCG CCACAAGAGT GTTCCGGTCC TACAACCGGG CCTTTCGCAC CGGGCAGCTG
CCCACACCCT TTGACTGGGA GCTGGTGCGA AAAAACGGTG AGCGGCTCTA TGTGGAGACA
TCGCTCTCCT TTATTCGGGA TGCCAACAAC AAGATCGTTG GCTTCCGGGG CATTGCACGG
GATGTCAGCC CCCGGAAAAA GATCGAAAAG GAGCTGCTCT ACCTGGCCTC CCACGATCAC
CTGACCGGGC TGTACAACAG GGGCGCCCTG TTTGAGAAAC TGCGTGAAAC CATTGCCTAT
GCCAAGCGAT TTCGCCAGCG GTGCGCCCTG CTCTTCCTGG ACCTGGACAA CTTTAAAACC
GTCAACGACA CCTGGGGCCA TGAAACCGGA GACCGGGTCC TAAAAGAGGC GGCCTTCCGC
CTGACCGGGC TGCTGCGGGA AACCGATTAC GTCTGCCGCC ACGGCGGCGA CGAGTTCACC
ATCATTCTGA GCAACTCAAA AAACATGAAT CCCCCCAAGG TGGCCCAGAA GGTCATTGAT
GCCATCTCCC GGCCCTTCGA CGTCGGTGAG AACAAAATCG CCGCCATCAC CACCAGCATA
GGGATCAGCG TCTATCCCGA TGACAGCGAC ACCATGGAGG ACCTGGTCAA GTACGCGGAC
AAGGCCATGT ACCGGGCCAA GGACCGGAAA GACCGATACA TCTGCTATAA CCGCGGAAAA
TTCACGAAAA AGCTGCCCCT GGAAATCTGA
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| Protein sequence | MGKITALSKK AVVFDYMGAA SSLEGLDARI DLLLHDSDTY IDDIACRIIE DRVIKKEGPP
DGRCLRRCSA RFIQLNADQQ RRLAHHATWS SNREVTRREH LRQEIEKSEE KYKTILENIE
EGYFEVDLAG HITFFNSSML KMIGYTGGEL LGMGYRSFMS SKTATRVFRS YNRAFRTGQL
PTPFDWELVR KNGERLYVET SLSFIRDANN KIVGFRGIAR DVSPRKKIEK ELLYLASHDH
LTGLYNRGAL FEKLRETIAY AKRFRQRCAL LFLDLDNFKT VNDTWGHETG DRVLKEAAFR
LTGLLRETDY VCRHGGDEFT IILSNSKNMN PPKVAQKVID AISRPFDVGE NKIAAITTSI
GISVYPDDSD TMEDLVKYAD KAMYRAKDRK DRYICYNRGK FTKKLPLEI
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