| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2430 |
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| Symbol | |
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| ID | 5695279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2935439 |
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| End bp | 2937553 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641265037 |
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| Product | spermine synthase |
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| Protein accession | YP_001530311 |
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| Protein GI | 158522441 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.161606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGTAC TGAATAGCCC GGTTAACTCC CTGATTCTGG CCACCGGCGT ATCGTCGGTG
GTCACCCAGC TGCTGACCAT CCGCGAGTTC CTGGCCCAGT TTGCCGGCAA CGAATGGACC
ATTGCGGTGG TTTTTTTCAA CTGGCTCGTG CTCGGCGGCC TGGGCACCTT TCTGGCCCGG
CCGGCGGGCC GGGGCCTGCT CCCTGTTTCG CCGGCGGCGC TGGCCCGGCT CTCCATGGTC
GCAGCGGTCC TACCGGTGGT CCACCTGCTG GCCATCCGGA TCCTGCGTGA CCTTTTTTTT
ACCTTTGGCA CCCAGGCCGG GTTTTACGGC CTGCTGACCT TCTCTTTTTT CACCACAGCC
CCCTACTGTC TGCTGATCGG GTTTCTGCTG CCCTACAGCC TCCTGGTGCT CCGGTCCCGG
GAGCCCGGCT ATGCCGGCGC CTCCGTTTAC ATGACCGACA ACATCGGGGA CGTGGCCGGC
GGCGCCTTGT TCTCCTTTGT GCTGATTTTT CTGGCCACCC CCATGACGGC CCTGATGATC
ACGGGCTTTT TCCTGCTGAT CGCCGCCCTC TGGCTTTTTA CCACGATAAG ACAAATGCGG
GCGGCCACCC TTGCGGGGGC CGGTGCCGCG GCCCTCATCC TGATGGCCGG CCTGGCTGTT
GAGCAGGCCA CTCTGGCGCC GGGCCAGGGA GAGGTCGTTC ATTACAAAGA GTCCCGCTAC
GGCCGCATCG TGGTTACCCG CCACCAGCTT CAGCACACCC TTTTTGTGGA TGGCCGGCCC
GTGGCCGGCA CATCCGATCC CCAGGCCGCC GAAGAAATGG CTCACTATCC CCTGGCCCAG
GTCGACACGC CCGGCCGGGT GCTGCTGGTG TCGGCCCTGT CCGGCATCCT TGGCGAAATT
GAAAAACACC GGCCCGGCCA TATCGACTAC GTGGAACTGG ACCCGGAAGT GGCCGGCGCC
ATGTTCCGGT TCGACCTGCT CTCCCCGGCC CCCAACGTGA CCGTGATCCA CCAGGATGCC
CGGCGCCTGC TGGCCGGTCC GGGCCCGGCC TATGACGCCA TTATCGTCTG CCTGCCCGAG
CCTGACACCT TTCAGCTCAA CCGGTTTTAC ACCGAATCTT TCTTTGTTCA GGCCCGCCGG
CGGCTTTCCC CCGGCGGGGT TCTGGCCTTT GCCATGGAGG GGTTTGACGC CTACGTGGCC
GAAGCCGACC GGCGAAAGCT CTCCACGGTT TACAACACCG CGGCCCGCAC CTTTGCCCAC
GTGGCCCTGG TGCCCGGCGG AAAGACCTTT TTCCTCTGTT CGGACCGGCC CGTGACCCTG
GACATTCCGG ATCGCCTTGA AAAAAAGGGG GTTTCCACGG CCCATGTATC GGGATATTTT
CACGGTACAA TCACACCCCG GCGGGTGGCC TACCTTTCCG CCCAAATCGA CCCGGTGGCC
CCTGTCAATA CCGACCTCTC CCCGGTCCTG ATGCAGCAAA TGTTTACCCG GTGGTTTTCC
CTGTTCGGCC AGTCCCCGGC CCCCTTCTTC CTGGCCGCCG GCCTGGTGCT GGCCGTCTGG
CTGGTCCGGG CCTCGGCCGG AGAGGTGGTG CTCTTTTCCA ACGGCTTTGT TCACATGGCC
GCCGAGATCC TGGCCATCTT TGCCTTCCAG ATCTTTTTCG GCTATATTTA CTTTCAAATC
GGCCTGCTGG TGACGGTGTT TCTGGCCGGT CTCCTGCCCG GCGCGTGGAT GGGACAGCGC
CTGCAACAGC GGTCAAAAAC AACCATTCTG GGGACAGACG CCCTGCTGAT CGTGCTGGTG
GGAGGGTTTG CCCTTCTGCT GTACGGCATA AAGGCAAACC TCAGCCCCTG GGCCTACCTG
GTGTTCGGCT TTGCTGTCTC CTGGGCCTGC GGATTCCAGT TTGCCGCCAT TCTTCAACGG
TTCGGCGACA CCCATAAACT TGCCGTCAAC GCCTTTTCCG CCGACCTGGT GGGCGCCGCC
TTCGGGGCCC TTGCCGCCAG CATTCTGCTG ATTCCCCGGT TCGGCCTGGC CGGCACGGCC
ATAGTCCTGA TAGGTCTTAA ACTGATCAGC ATGCTGGTAA TGGGAATGCA TCATGAAACA
GATCTCCCGG CGTGA
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| Protein sequence | MKVLNSPVNS LILATGVSSV VTQLLTIREF LAQFAGNEWT IAVVFFNWLV LGGLGTFLAR
PAGRGLLPVS PAALARLSMV AAVLPVVHLL AIRILRDLFF TFGTQAGFYG LLTFSFFTTA
PYCLLIGFLL PYSLLVLRSR EPGYAGASVY MTDNIGDVAG GALFSFVLIF LATPMTALMI
TGFFLLIAAL WLFTTIRQMR AATLAGAGAA ALILMAGLAV EQATLAPGQG EVVHYKESRY
GRIVVTRHQL QHTLFVDGRP VAGTSDPQAA EEMAHYPLAQ VDTPGRVLLV SALSGILGEI
EKHRPGHIDY VELDPEVAGA MFRFDLLSPA PNVTVIHQDA RRLLAGPGPA YDAIIVCLPE
PDTFQLNRFY TESFFVQARR RLSPGGVLAF AMEGFDAYVA EADRRKLSTV YNTAARTFAH
VALVPGGKTF FLCSDRPVTL DIPDRLEKKG VSTAHVSGYF HGTITPRRVA YLSAQIDPVA
PVNTDLSPVL MQQMFTRWFS LFGQSPAPFF LAAGLVLAVW LVRASAGEVV LFSNGFVHMA
AEILAIFAFQ IFFGYIYFQI GLLVTVFLAG LLPGAWMGQR LQQRSKTTIL GTDALLIVLV
GGFALLLYGI KANLSPWAYL VFGFAVSWAC GFQFAAILQR FGDTHKLAVN AFSADLVGAA
FGALAASILL IPRFGLAGTA IVLIGLKLIS MLVMGMHHET DLPA
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