Gene Dole_2423 details

Gene Information

• Locus tag: Dole_2423
• ID: 5695271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 2924015
• End bp: 2926063
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641265029
• Product: SH3 type 3 domain-containing protein
• Protein accession: YP_001530304
• Protein GI: 158522434

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000143632
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAGGAA ATACATTGGA CAGAAAACCG ATTGCGCTGT TTTGCTTTGC TTTTTTGCTT 
TTTTTCTCCG TCGCGCTGGC CTTTGGAAAC AGTGCCGGCC CTGCCCAGGA CCCTGCCTCT 
GAAACACCGG ATTCGGAGTC CCGACAGACG CTTTCAGGCG TGACGGCCGA CCAGCCCCCT 
GAAACAGTAC GCGCCACCGT GGATGTCCTC AACATACGGT CCGCCCCGTC CCTGGACGGC 
AGCCGCGTGG CCCGCCTGCT GGCCGGCGAG GCCGCCGCCG TTCTGGAGAC TCAGGAAGAC 
TGGCTCCGCA TCGAAACCGC TGACGGCACA ATCGGTTATG TGTTCAGACA ATACACGACC 
GCCCTTCCCT CTTCGGAAAA GGTTTCCGGC CCTGCAGAAG CCGATGCACC GGCGTCCCCG 
AAGCCGGTTG TTGTGGCATC AGCGACTCCT GGCCTGCGGC CGCTTGGCAA TACACACCTT 
GCCAAAATAT CAGGACAAGG CCTCTCCACC GACATGACCC AGGCGGAGCT GGACGGGATC 
GTCGGCCAGG GCTTTATCTC CGCTCTCACG CCGGAGGAGA TCGCCGCCAT TGACGCTCAG 
GGCGCCATGT CTCTGGAAGA GTCGATGCTG AAAACCAGGG ACCTGGAGCG CGTCATCGCC 
CAGGGCGTGA CCTTTGTGGT GGACAAGTCA AAAGTCTCCC CGGAAGAACT TGAAAAGATT 
CAGGGCCAGG GTACGGTGGC CGACATCGGC CGGGCCCCTT TTTCCGTTCA GGCGGGGGTC 
TACAAAATCC GTGAAAACGC CATCTCCATG CTCTCCGACC TCAAGGGAAA GGGCTATGAT 
CCCTATATTT TCCAGACGGT CGGCGACACC GGCGAGACCC TCTACGCGGT CCGGATCGGT 
GATTACGAGA CCCTTCAGGA CGCCTATGCC GTCACCACCC ACTTCCAGTC AAAGGAGAAC 
AGGCCGGCCA TTGTCACCTA CATCAACTCG CTGAAAACCG TGAGCGTGGA AGATGTGAAA 
CCGGCCGGCA CCACGGTACC GGTGGTGGCT CCTGTTCCTA AACCGGCCAG TGCCTATGAA 
GGGGATCTGG GAGACCTCTA CACCGAGATG CAACTGCTGC GCGAAGAGGT GGAACGGCTG 
CGGACCGAGT CCGAGGCCAG GGAAATGCTT CGCATGACCG AGGCCGAAGC CCGTAAAGAA 
GAAGAAGAGA TCCTTTCCGC CGCCAGTCGC AACTACACCA TGTCACCCAA AGGCACCCTG 
AATTTCGACT ACTCCTTCGG CTACACCTAC GACTCCTATG ACGTGGCCGA CTGGACCGCG 
CTGGTGCTTG AGCATTCGGC CAACCACAAC ATCAACAACA CCGTTGCCGC CGGATACTCC 
TTTTCCGACA ACTTCAGGGC GAACGTGAGC ATTCCGTTTG TCTACAAATA CCAAGACCTC 
GGCCAGACCG GGTCCAAAAG CGTCACCGAC CTCGGCGATG TCTCCGTGGG CGCCAACTGG 
CAGCCCTTTC GCACCGGGGA GGACTTTCCG GCCCTTATCT TCTCGTCCAG CATCTCCATT 
CCCACCGGCC GAAGCCCCTA TGAGATCAAC CCGAGAGAAG ATCTCTCCAC CGGCGCCGGT 
CTTTTTGCCG CCTCCCTGGG CGTTTCCGCC AGCAAGAGCC TGGACCCGGT GGTGGCATAC 
GGCGGCCTTC AATACACCTA TGCCCTGGAG GAGAGCGGCC TGAACCAGCA CCTGGCCGAC 
GGCCTGACCT TAAAAAAGGT GGAACCCTCC GGCGGCGCCG TGGGCCTCAG CATGGGCCTT 
GCCTATGCCA TGTCCTACAA GGCGTCCATT CACGCCGGGT TTTCCTACGC CTATATCTTC 
GGCACCACCT ATCATTATGA TGGCGGCAGA ACCGCCGACT CCGGCACGGG GGCCTCGGGC 
AGCCTGTCGG TGGGTACCGG CTGGAAGCTT GACAAAAGGA CCATCAGCGT GAACCTGGGC 
ATCGGCCTGA CCAATGACGC GTCCGACTTT TCCTTTTCTT TCAGAATCCC CTTTGACTAC 
GAACTGTAA 

 

Protein sequence

MGGNTLDRKP IALFCFAFLL FFSVALAFGN SAGPAQDPAS ETPDSESRQT LSGVTADQPP 
ETVRATVDVL NIRSAPSLDG SRVARLLAGE AAAVLETQED WLRIETADGT IGYVFRQYTT 
ALPSSEKVSG PAEADAPASP KPVVVASATP GLRPLGNTHL AKISGQGLST DMTQAELDGI 
VGQGFISALT PEEIAAIDAQ GAMSLEESML KTRDLERVIA QGVTFVVDKS KVSPEELEKI 
QGQGTVADIG RAPFSVQAGV YKIRENAISM LSDLKGKGYD PYIFQTVGDT GETLYAVRIG 
DYETLQDAYA VTTHFQSKEN RPAIVTYINS LKTVSVEDVK PAGTTVPVVA PVPKPASAYE 
GDLGDLYTEM QLLREEVERL RTESEAREML RMTEAEARKE EEEILSAASR NYTMSPKGTL 
NFDYSFGYTY DSYDVADWTA LVLEHSANHN INNTVAAGYS FSDNFRANVS IPFVYKYQDL 
GQTGSKSVTD LGDVSVGANW QPFRTGEDFP ALIFSSSISI PTGRSPYEIN PREDLSTGAG 
LFAASLGVSA SKSLDPVVAY GGLQYTYALE ESGLNQHLAD GLTLKKVEPS GGAVGLSMGL 
AYAMSYKASI HAGFSYAYIF GTTYHYDGGR TADSGTGASG SLSVGTGWKL DKRTISVNLG 
IGLTNDASDF SFSFRIPFDY EL