Gene Dole_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2408 
Symbol 
ID5695256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2899888 
End bp2901468 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content56% 
IMG OID641265014 
Producthypothetical protein 
Protein accessionYP_001530289 
Protein GI158522419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATTC CCGCCCGAAA GATTCGTGTG CCGGGGCCTG TTCTGGTGCC GTGGCTGGTC 
TCTCTTCTTC TGTTTTCCCT GATGGTCTAC GGCGGCGTTC GAACGCCGGA CGGCGAGGTG
GTTTTCCGTG TGGGAGAATC CCTTGCAATG AACGGCACTT TTGCTGTTGA AAAGGACCTG
GAGGCATGGC CGGATTTTGG CCTGCCCAGA GGGTGTGACA ACAGGCGATA TTCGGGGTTC
GCTCCCGCGC AGTCTGTCCT TCTGGCCCCG TTTATTCGGG TGGCCTCATG CCTTAACCAG
ACCCGATGGT ATGAATACCG GCGCATTCCC ATCAGCTTTG CCGCGGATGG ATTCTCTTTC
CGGTCCTACA TTCTCAAACA GCGACCATCG GACATGGCGC CCCATGCCCT GCGGTTCCTG
GTGTCCTTTT TTACCCCCCT GGTTTCAAGC CTCGTGGTGG TGTTACAGTT TCTGATCATT
CGCCGGCTGA CCGGCAGCCC GCTTGCGGCC TTTATCACAG CCCTGCTGCT GGGCCTGGCC
ACGCCCCTGT GGCACTATTC AGGAACGATG TTTGCAGAGC CCCTGGCCAT GGTTTTTGTC
CTGTTGTCTT TTTACCTGAT TTCTCCGCGA AAAGATCTCA ATACTTTCCC CGTTTCAGGT
AAAGCCGTCC GTTTTTTGGG CAGCGGCCTG CTGTTGGGGC TTGCCTTTAC CACCCATATC
ACGGCGATTT TGATGACACC CTTTTTTCTG GTGATTGCCA TTTCTCCGTG GGCACGGTCG
AAAACCGGCT TTTGGGAAAA CCGGTGGATC TGTGCGCGGG TCGCGGCAGG CTTTACTGCC
GGAACAGGTA TTATGGCCCT GCTCTACGGC ATCTATAATT ACATGCGGTT CGGCAATCCT
TTTGAACTGG GACGTCAGAC CGCTGAGGGG GTGGCTTACG GAGTCTTTAC CACTCCATGG
GAAGGGCTGG CCGGTCTTCT TGCCAGTCCG GGCAAGGGGG TTTTCTGGTT CTGTCCCATT
CTGATCGCCG CTGTTTTCTG GTGGCCGTAC CTGCATAAAC GCTACCGGTA TCTCTCTTTT
GTTATCATCG CCATGGTCCT GTTTCGCCTG CTTTTCATTG CGTGCCGCAG CGACTGGCAC
GGCGGTTTCT GCCTGGGGCC CCGATATTTT CTCATGGTGC TGCCGTTCCT GCTGATACCC
ATCGGGTGCC GGCTGGCCGA TTTTTTCGCC GGGGACCGTC CGCCCGGTTT TTGGCGACCG
GTTGCCGCCG GGGCGTTCCT GTTTGCCTGT ACGGTGCAGC AGCTCTATTT CTGTCTCGGT
GAACCCATAT CCTTTTACTA CATGCTCAGG ATGGTCAATC TCCAGCAGGG AATCTCCATC
ATCGCTAACA ACCAGATATA TTTTCAGTGG AGCGCCTCTC CCCTGGTGGG CCTGTTTGAT
GGCAGACGGG GGCCGTTTCT CTTGCAGTCC GTCCCCCTGG GGCAGTGGGA ACTGCTGGCA
CTCTGTGCCA TGGCCCTGGC CCTGGTGACG GGGCTCCTCA CTTTTTATTT GATCCGCACC
AAAAGAAAGC GCTATACATA G
 
Protein sequence
MIIPARKIRV PGPVLVPWLV SLLLFSLMVY GGVRTPDGEV VFRVGESLAM NGTFAVEKDL 
EAWPDFGLPR GCDNRRYSGF APAQSVLLAP FIRVASCLNQ TRWYEYRRIP ISFAADGFSF
RSYILKQRPS DMAPHALRFL VSFFTPLVSS LVVVLQFLII RRLTGSPLAA FITALLLGLA
TPLWHYSGTM FAEPLAMVFV LLSFYLISPR KDLNTFPVSG KAVRFLGSGL LLGLAFTTHI
TAILMTPFFL VIAISPWARS KTGFWENRWI CARVAAGFTA GTGIMALLYG IYNYMRFGNP
FELGRQTAEG VAYGVFTTPW EGLAGLLASP GKGVFWFCPI LIAAVFWWPY LHKRYRYLSF
VIIAMVLFRL LFIACRSDWH GGFCLGPRYF LMVLPFLLIP IGCRLADFFA GDRPPGFWRP
VAAGAFLFAC TVQQLYFCLG EPISFYYMLR MVNLQQGISI IANNQIYFQW SASPLVGLFD
GRRGPFLLQS VPLGQWELLA LCAMALALVT GLLTFYLIRT KRKRYT