| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2307 |
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| Symbol | |
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| ID | 5695155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2794397 |
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| End bp | 2794909 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641264913 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_001530188 |
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| Protein GI | 158522318 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00013128 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCA GCGAATTCCT ATGTGTGGGC AAAATCGTCG GTATTCATGG AATTCGCGGA
ACTGTCCGGG TCTATTCCCA CTCCGGTGAC ATCGCGGAGT TCTCGCAGGG AAATACCCTT
TTTCTACGAG GTCCCAAAGG CGACGAGCGG GTTTGCACCA TTGAATGGTG CAAACCCCAT
GGTCGCCATT TCCTTTTGGG GGCTCTGGAA CTGGACAGCC GCGAGCAGGC CGCGGCCGTG
GTGGGATACG AACTATTCGC GCTGCGCGCC TCCCTGCCGC CCCTTGAGGA CGACACCTAT
TACTGGGATG ACCTGATCGG CCTGGCCGTG TTTGACAAAA AGACCTTGCT GGGCCGTATC
ACATCGATTA TTCCCACGCC GGGCAACGAT GTGTATGTGG TGACCGACGC CGATACCGGG
AAGGAGACCC TGGTGCCCGC CCTCAAGTCC GTGGTCGGGC ACATCGACCT GGCGGCCGGC
ACCATGCAGG TGAGCCTGCC GGAATCCCTG TAG
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| Protein sequence | MNSSEFLCVG KIVGIHGIRG TVRVYSHSGD IAEFSQGNTL FLRGPKGDER VCTIEWCKPH
GRHFLLGALE LDSREQAAAV VGYELFALRA SLPPLEDDTY YWDDLIGLAV FDKKTLLGRI
TSIIPTPGND VYVVTDADTG KETLVPALKS VVGHIDLAAG TMQVSLPESL
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