| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2274 |
|---|
| Symbol | |
|---|
| ID | 5695122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2752960 |
|---|
| End bp | 2754090 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641264880 |
|---|
| Product | glutamate synthase (NADPH) |
|---|
| Protein accession | YP_001530155 |
|---|
| Protein GI | 158522285 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0067] Glutamate synthase domain 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCGCT TATTCGCAAT CACCAGCGAA ACCCCCATGA CACCGATGGT GGCCCTGGAG
GCCCTGGATG TCATGCGCGA AGGCCATGAC GGATCCGGGG TGGGCATCTT TCTGCGGGAC
CTGGGCGGGC CCTTTGAAAA GATAAAGGAC TCTCCCATTC TCTCGGGCAT CTTCACCGAC
CAGGGCATCC GTCGCCTGGA CCATTACATG ATGGAGCACG GATTTCTCAC CAAGCACAAG
GTCACCATCA AGGTGCCCAA GGAACAGCCC CCGGGTGTTC CTAAAAGGGA TATCTACCTG
ATCCGGGCCT ATGAATACCC GGACAGCTGG GAAGGATGGA GCGAGGAAAA AATTTACGCC
GAACTGACCC GCATCCGGCT GGAACTGGTT GAGATGGGGG CGGAAAAAGA AGACATGATC
GTGTTCTCCT TCTGGCCGGA CGTAATCATG TTAAAAGAGA TCGGCGACCC GTTGACCGTG
GCCCGGTATC TGCAGCTTGA CCGGGAAGAA CTCCAGGCAC GGGTGATCAT GGCCCAGGGC
CGGCAGAACA CTAACTATGC CATCAACCTG TATGCCTGCC ACCCCTTTTT CCAGGGCGGA
TTTTCCACCA TGACCAACGG CGAAAACACC GCCTTTGTGC CGATCCGGGA GTTTCTCATG
TCCCGGAACA TTCCCGGATA CAGCGGGTTC GAGTCGGACT CCCAGGTGTT TGTTTTCATC
CTGCACTACC TGTTCAAGCA GCTGGGGCTG GGCATCGACG CCTACAAACA TATCATCACT
CCGCTTCAGG ACGATGTGCT GGCGGCCCAC CCGGACCATG TGCTGCTCAA GCACCTGAAG
CAGACCTGCC GCCGCCTGAT CATCGACGGC CCCAACTGCG TGATCGGTTG CTTGCCAGAC
CATTCGCTCT TCATGGTGCA GGACAGAAAG AAGCTCCGGC CCGGCGTGGT GGGCGGCCGG
CCCGGTATGT ATGCCTTTTC ATCGGAAATC TGCGGCCTGG ACGCCGTGAT TCCCAACCGG
GACAAGTCAA AGGATTTTCA GCCCATGTAC ATGGACACCG TGGTGGTGGG TCCGGACCGC
GGGGAGGTTG TCGTATGTCA GCAAACGGAA GCATTAGCCC TTCAACACTA A
|
|---|
| Protein sequence | MCRLFAITSE TPMTPMVALE ALDVMREGHD GSGVGIFLRD LGGPFEKIKD SPILSGIFTD
QGIRRLDHYM MEHGFLTKHK VTIKVPKEQP PGVPKRDIYL IRAYEYPDSW EGWSEEKIYA
ELTRIRLELV EMGAEKEDMI VFSFWPDVIM LKEIGDPLTV ARYLQLDREE LQARVIMAQG
RQNTNYAINL YACHPFFQGG FSTMTNGENT AFVPIREFLM SRNIPGYSGF ESDSQVFVFI
LHYLFKQLGL GIDAYKHIIT PLQDDVLAAH PDHVLLKHLK QTCRRLIIDG PNCVIGCLPD
HSLFMVQDRK KLRPGVVGGR PGMYAFSSEI CGLDAVIPNR DKSKDFQPMY MDTVVVGPDR
GEVVVCQQTE ALALQH
|
|---|
| |