Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2163 |
Symbol | |
ID | 5695009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2622124 |
End bp | 2622669 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641264767 |
Product | putative membrane protein with signal peptide |
Protein accession | YP_001530044 |
Protein GI | 158522174 |
COG category | [S] Function unknown |
COG ID | [COG3216] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000423148 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA GAAAACGGCT TGCCCTTTTA CGTGAACAGC AGGACCTGTT AAAAAAGGGG CTGCGTAACA CTCAACTGCA CCGGCTCTTT GGAGAACGGA TATTTTCCCA CTCTCTCTGG GGATTTGAAA AGGAGGCCCT GGCCGGCGGA CTTTCCCTCG GCCTTTTTAT CGCCTTTACC CCCACCATTC CCTTTCAGAT GATTTTCTGC GTACTCGGCG CCATTTTCTT CCGGGTCAAC CTGTTTGCCG CCCTGACCGC CTGCTGGGTG ACCAACCCGC TGACAGCCCC TCCGATTTAC CTGTCGGCCC ACTGGCTCGG TCGCTTTCTT CTGGGCCAGT CAGAATTTCT GAAAACCATC ATCTCCCTTT TCGGGTTCGG AGAAAAAATG GGCCGGCTGG TGGAACACAC CGCCTACCTG TGGGCCGGTT CTCTTCTGTT TGCCATTGTC GCCGCCATCA TCGGCAATCT GCTGGCCAAA AAGGGATGGG ACCTGCTCCA CCGGATAAAA GAAGGAAAAC AGGAAGCAGA GAATAAAGCG GATTAA
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Protein sequence | MKIRKRLALL REQQDLLKKG LRNTQLHRLF GERIFSHSLW GFEKEALAGG LSLGLFIAFT PTIPFQMIFC VLGAIFFRVN LFAALTACWV TNPLTAPPIY LSAHWLGRFL LGQSEFLKTI ISLFGFGEKM GRLVEHTAYL WAGSLLFAIV AAIIGNLLAK KGWDLLHRIK EGKQEAENKA D
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