Gene Dole_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2163 
Symbol 
ID5695009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2622124 
End bp2622669 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content53% 
IMG OID641264767 
Productputative membrane protein with signal peptide 
Protein accessionYP_001530044 
Protein GI158522174 
COG category[S] Function unknown 
COG ID[COG3216] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000423148 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA GAAAACGGCT TGCCCTTTTA CGTGAACAGC AGGACCTGTT AAAAAAGGGG 
CTGCGTAACA CTCAACTGCA CCGGCTCTTT GGAGAACGGA TATTTTCCCA CTCTCTCTGG
GGATTTGAAA AGGAGGCCCT GGCCGGCGGA CTTTCCCTCG GCCTTTTTAT CGCCTTTACC
CCCACCATTC CCTTTCAGAT GATTTTCTGC GTACTCGGCG CCATTTTCTT CCGGGTCAAC
CTGTTTGCCG CCCTGACCGC CTGCTGGGTG ACCAACCCGC TGACAGCCCC TCCGATTTAC
CTGTCGGCCC ACTGGCTCGG TCGCTTTCTT CTGGGCCAGT CAGAATTTCT GAAAACCATC
ATCTCCCTTT TCGGGTTCGG AGAAAAAATG GGCCGGCTGG TGGAACACAC CGCCTACCTG
TGGGCCGGTT CTCTTCTGTT TGCCATTGTC GCCGCCATCA TCGGCAATCT GCTGGCCAAA
AAGGGATGGG ACCTGCTCCA CCGGATAAAA GAAGGAAAAC AGGAAGCAGA GAATAAAGCG
GATTAA
 
Protein sequence
MKIRKRLALL REQQDLLKKG LRNTQLHRLF GERIFSHSLW GFEKEALAGG LSLGLFIAFT 
PTIPFQMIFC VLGAIFFRVN LFAALTACWV TNPLTAPPIY LSAHWLGRFL LGQSEFLKTI
ISLFGFGEKM GRLVEHTAYL WAGSLLFAIV AAIIGNLLAK KGWDLLHRIK EGKQEAENKA
D