Gene Dole_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2097 
Symbol 
ID5694940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2548855 
End bp2549721 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content44% 
IMG OID641264698 
ProductUbiA prenyltransferase 
Protein accessionYP_001529978 
Protein GI158522108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGTA AATCGACTTT ATTGCATCTG CGAATTCCCT TTTCATTTTT TCTGATGCCC 
GTATTTTTAT TTGCATTGGG CATAAGTATC AACCCATCAG GTTACCGGAT TGTTTTGACC
TTCATAGTGT TGCATCTTTT TATCTATCCG GCCAGTAATG CGTACAACAG TTATTTTGAT
AAAGATGAGG AAAGTATCGG TGGCCTGAAA CATCCGCCTG CGGTGGAAAG AGATCTATAT
GCCACATCCC TGGTCTTTGA TGGAGCGGGC ATACTCCTGG CTCTCTGCAT CAGCCGGCAG
TTTGCGGTAA TGGTGTTTAT TTACGGCCTC ATCAGCAAGG CTTATAGCCA TCCCTCCATT
AGAATTAAGA AGTATCCCTG GTTGAGCTGG CTGATCGCCG GCTTTTTTCA GGGTTTGTTC
ACCTTCTGGA TGTGCTACAT GGCGCTGAAT CACAGGGGAT TTGACGTTAT TCTGCAAGCG
GATATATTTA TTCCGGCAGT ATTGACCACC CTGATTTTGA TGGGATTTTA TCCTCTGACG
CAGATTTATC AACACAAAGA GGACAAAAAA AGAGGTGATC TTACCTTAAG CTGTCTTCTC
GGCATCAGGG GAACCTTTGT CTTTTCTGCC GCCGTGTTCC TGATCGCACT ACCTGGCTTC
CTGGTGTATT TCAAATGGTA TTTCGGCTGG CAGCTGTTTT ACCTCTTCCT GCTTTCTATA
ATACCGGTTT TGGCCTTTTT TAGCCGGTGG TTTCTGAAAG CCATAAACAA CCCGGCCAAG
GCGGATTACA GTCACACAAT GCGTCTGAGC ATGATTTCAT CGCTGTCCCT GAGCACCTTT
TTTATTTTGC TTTATTTTGT AAAATAA
 
Protein sequence
MISKSTLLHL RIPFSFFLMP VFLFALGISI NPSGYRIVLT FIVLHLFIYP ASNAYNSYFD 
KDEESIGGLK HPPAVERDLY ATSLVFDGAG ILLALCISRQ FAVMVFIYGL ISKAYSHPSI
RIKKYPWLSW LIAGFFQGLF TFWMCYMALN HRGFDVILQA DIFIPAVLTT LILMGFYPLT
QIYQHKEDKK RGDLTLSCLL GIRGTFVFSA AVFLIALPGF LVYFKWYFGW QLFYLFLLSI
IPVLAFFSRW FLKAINNPAK ADYSHTMRLS MISSLSLSTF FILLYFVK