| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1890 |
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| Symbol | |
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| ID | 5694730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2291737 |
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| End bp | 2293059 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641264488 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001529771 |
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| Protein GI | 158521901 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.835954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGAAAA AGCGGCGAAA ACGGGCGGCC GGCTCCGGCA AACGGCACAC GGCCCCCCGG
CTGGTGGTCA GCGACGGTCA CGGCCGGGTG TTTGAGATTC CGGAGCTGGA GATGGCGGGC
CGGCAGCGCG AAATTTTAAA ACGGCCCGCA AAACCGGAGT TGATCCCCCT GCCCCACGGC
AGCAGCCTGT TTGAGCTGCC CGGCCGGGTG CCGGTGGGAT ATGATCCCGC GCAAAAACGC
TTTGTGCCGG TGACCCATTA TCAGGGGGAG CCGGTGATCG CTGTGGCGGC CTTTATGGCA
CCGGCCTACT CCCAGCTTTT GCTGTCCGCC TGCCAGGTGA AAGACCCAAA GGCCCGGCTG
CCCCTGTTTG CCTATACCGC CGTGGGCTGG AACGCCGACC GGTTTGTTGT TGCCGCCTGC
CGGGTGGATG CCGACATCCG CCAGGACCTT GACCAGATGG ATGAACGGAC GATCGAGGCC
GGCGCCGTCA AAACCCTGAA ACGTTATCCG GGCAACCGGC TGGTGGAGCA CCTGGTCCAG
AACTGCGTGC GCCGCTACCA CTGCCCGGCG GCCCAGAATT TTGTCCAGGA CCGGTGGGAG
TGCCCGGTGC CCACCAGCAT CTCCTGCAAC GCCCGGTGCC TGGGCTGCAT CTCCTGGCAG
CCAAAAACCA GCGGCGTGCC CGTAACCCAG GACCGGCTCG CGTTTGTGCC CACGCCGGAA
GAGATTGTGG AATTCACGGT TCCGCATCTT GACAATGCCC CCCGGCCGGT CATCAGCTTC
GGCCAGGGAT GCGAGGGAGA GCCCCTGCTT CAGGGAGACG TGATCGAGGC GGCCATCTTG
AAAATCCGGA ACCGCACATC CGCCGGCACC ATCAACCTCA ACTCCAACGC CAGCCTTCCC
CGGGTGGTGG AACGGCTCTG TGCCGCCGGG CTGGACAGCA TTCGGGTCAG CCTGAGCAGC
GCGCAGAAGG CCCTTTACCT TGCCTACTAC TCGCCGCGCG GCTACGCATT TGAAGATGTT
TTGGAATCCA TGAACGTGAT GCGGCGCCAC GGCAGGTGGA TATCCCTCAA CTACTTTATC
TTTCCCGGCC TGACCGATGA TCCGGAAGAG ACGGCGGCCC TGATTGACCT GGTCCGGCGG
TTCCGCGTGG ACTACATCCA GATGCGGAAC CTCAACATCG ATCCGGACTG GTACATGGAG
AAGATGGGAC TTGCCGGTTT GTCCTCCCGG CCCATGGGCC TTCTTGCGTG GCAGAAAAAA
GTAAAACAGG CGGCGCCGTG GGTGAGGTTC GGGTACTTTA ATCCGCCGAA GCAAGCCTGG
TAA
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| Protein sequence | MEKKRRKRAA GSGKRHTAPR LVVSDGHGRV FEIPELEMAG RQREILKRPA KPELIPLPHG
SSLFELPGRV PVGYDPAQKR FVPVTHYQGE PVIAVAAFMA PAYSQLLLSA CQVKDPKARL
PLFAYTAVGW NADRFVVAAC RVDADIRQDL DQMDERTIEA GAVKTLKRYP GNRLVEHLVQ
NCVRRYHCPA AQNFVQDRWE CPVPTSISCN ARCLGCISWQ PKTSGVPVTQ DRLAFVPTPE
EIVEFTVPHL DNAPRPVISF GQGCEGEPLL QGDVIEAAIL KIRNRTSAGT INLNSNASLP
RVVERLCAAG LDSIRVSLSS AQKALYLAYY SPRGYAFEDV LESMNVMRRH GRWISLNYFI
FPGLTDDPEE TAALIDLVRR FRVDYIQMRN LNIDPDWYME KMGLAGLSSR PMGLLAWQKK
VKQAAPWVRF GYFNPPKQAW
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