Gene Dole_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1883 
Symbol 
ID5694723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2281320 
End bp2282210 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content60% 
IMG OID641264481 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_001529764 
Protein GI158521894 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAT CTTTTGCAGT TGTGGGCGGC GGCCGGGTGG GCACGGCCCT TGGCGCCAAC 
CTGGTGCGTG CCGGTTACCC ATGTGTCGGT GTGGCCTGCA CCACTCGGGC ATCGGCGCAA
AAGGCGGCAG CCCTTATCGG AGAAGGCGTC GCTTCGGTCA CGCCATGGGA AATCACGCCC
ACCGCGGATA TTGTGTTTAT CACCACGCCG GACAGTGCCA TTGCCCATGT ATGCGAACAG
ATCGACGCGC ACAAGGGGTT CGCACCGGAG GCTGTGGTGC TTCATTGCAG CGGCGCCCTG
CCCTCCACCA TTTTAAGAAT CACTTCCGGC GAAAAGGCTG TAACCGGTTC TCTTCACCCA
CTGCAGAGTA TTGCCGAAAA CGATCCGGAC CGCAATCCGT TTGCGGGCAT CGTGATGGCC
GTGGAGGGTG CGCCCAGGGC CGTTGACACG GCCACCACCA TCGGCGCCGA CCTGGGCGCC
ACCTGCTTTA CCATTCACAC CGAAGCCAAG ATGCTTTACC ACGCCGGTGC CGTGGTGGCC
TCCAACTACC TGGTTACCCT GTGCGACGCG GTTTTTTCCT TGCTTGAGGC CGCCGGCATC
AACCGGGACC AGGCCTTTGA TATCCTGGGC CCCCTGCTTT CCGGCACGCT TGAAAACATT
AAAACCGTTG GCATTCCCCA GGCTCTGACC GGGCCTGTGG CCCGGGGAGA CGCCCCGATT
ATCAAGGCCC ACCTTCAGGA GATAAAAACC CGGAAACCTG ATCTGCTGCC GGTTTACCGG
GTAATGGGGC TTCATACCAT CAACGTGGCA ATGGCCAAAG GCACCATCAC CGAGGCCCAG
GCAAAAACCC TGCGTAAAGT ATTTGACGCA AACGGCGGGT CCGGGGAATA G
 
Protein sequence
MKPSFAVVGG GRVGTALGAN LVRAGYPCVG VACTTRASAQ KAAALIGEGV ASVTPWEITP 
TADIVFITTP DSAIAHVCEQ IDAHKGFAPE AVVLHCSGAL PSTILRITSG EKAVTGSLHP
LQSIAENDPD RNPFAGIVMA VEGAPRAVDT ATTIGADLGA TCFTIHTEAK MLYHAGAVVA
SNYLVTLCDA VFSLLEAAGI NRDQAFDILG PLLSGTLENI KTVGIPQALT GPVARGDAPI
IKAHLQEIKT RKPDLLPVYR VMGLHTINVA MAKGTITEAQ AKTLRKVFDA NGGSGE