Gene Dole_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1801 
Symbol 
ID5694641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2181285 
End bp2182727 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content46% 
IMG OID641264399 
Producthypothetical protein 
Protein accessionYP_001529682 
Protein GI158521812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCT GCCGCATCTA CCGCCTGAGT AAATCTTCAA TACGCTGTGC AGCGCTCATG 
GGAGCGGCAT GCCTGATCGG TCTTCTGCTG GTTTTAAAAC CCAGCCTGGG AATGGCAATC
GGTATCCTGC CGTTTGTGTT ATGGCTCGGT ATAACTGAGA AGAAAAACCT CCTTTTCCTT
TTTCTGCTGC TGCTCCCCTA TCATACCTCG CCATTACTGG CAGAAAACCT CATGGGTATC
ACCGGTGCCA AACCCTTTAA CCTGATTGCC GCGTTTCTGC TGTTGATGCT TTTTTTCCAT
CACGGCGCAC TGTTTCGCAC CGAAGATGCG CTCGAGAAAA GAGCCGTCTG GTTTTTCTGT
GTTTACCTTT CCCTGTTTGC GTTTACGGTA ATACGGTCGA TTGACCATCT TCCCTTGCTG
AATATGATCT CTCCTGAAAA TTTTCACCGG TCGTCTGTGA ACCACCTGCT GACCTTTTTT
ATCCGCCCGG CCCTTTTCAC GATGTCTTTT GTCTATGTGC TCAAGCATAT TAAAACGGGA
AAAGAGATCA ACCGGTGTAT TGATATGATA TGCATTGCAA TTTTTTTATT ATCCTGGATG
GTTCTGTTTA TATCTATTGC CAATATAGAC AAAATCACTA TCAGCCGGAT ATATGTCAGA
GATGCGATCA GCTTTTTTTT TAATGTTCAT TATAACGCCA TCGGCAGTAT TTATATCGCA
TGCACCCCGC TTCTTGCACT ACGGGCGCTG ACAGGCCGGC CCTTCCCATT AATAAATTAT
GCGTTGGCAG GAATCGCCGT GTTGCTGCTT CAGTCCAGAA GCACCATTGC TGTTTTCCTG
GGCGGCACCA TTTTGCTGCT CTATTGTTTA AAAAACTGGA AAGCCATGGC CTTTTTTGCC
TGTATTCTGG TTTTGTTTTT TTTGTTCTGG CTGCCGGAAT TTCTTGAGCG CGTTCTTTTG
ATCGGTTTTG ACACGGGCGA TCCGAACGCC ATCTTCACGG GCAGGATTGA TAAAATCTGG
CTGCCATTAA TAACAGAGCG GCTTCGCGAC CCCTCTGCAT TACTGTTTGG CCGTGGACTC
TATTCAATAC TCATAAGCAA CGCCTACCTG AGCAGGGAGA TATTCCAGGT AAACACAGCC
CATAATGCAT TCCTGGCGCT CTTCCTCGAC TGTGGATTGA TTGTTTTTTC CTTGTTTGTC
TTTTATCTGA CTGTATTTTT AAAAAAGGCG TGGTCTCTGG CAAAAAAGGC CGACACATCG
ACGGGATGGG CGCTTTTCAC CTGTCTGATC ACCTACCTGG TGGGCACCAT ATCCGGAAGA
GACTTTTTCC CTTCACGTCA TAACATGTAC ATGTTTCCCA TCATCGCACT GCTGATTAAT
TATTTTCGGT TACACCTTTC TGCCGGTAAA TATAAAGAGG CCCCTTTTCC AAATGGCGAC
TAA
 
Protein sequence
MTTCRIYRLS KSSIRCAALM GAACLIGLLL VLKPSLGMAI GILPFVLWLG ITEKKNLLFL 
FLLLLPYHTS PLLAENLMGI TGAKPFNLIA AFLLLMLFFH HGALFRTEDA LEKRAVWFFC
VYLSLFAFTV IRSIDHLPLL NMISPENFHR SSVNHLLTFF IRPALFTMSF VYVLKHIKTG
KEINRCIDMI CIAIFLLSWM VLFISIANID KITISRIYVR DAISFFFNVH YNAIGSIYIA
CTPLLALRAL TGRPFPLINY ALAGIAVLLL QSRSTIAVFL GGTILLLYCL KNWKAMAFFA
CILVLFFLFW LPEFLERVLL IGFDTGDPNA IFTGRIDKIW LPLITERLRD PSALLFGRGL
YSILISNAYL SREIFQVNTA HNAFLALFLD CGLIVFSLFV FYLTVFLKKA WSLAKKADTS
TGWALFTCLI TYLVGTISGR DFFPSRHNMY MFPIIALLIN YFRLHLSAGK YKEAPFPNGD