| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1722 |
|---|
| Symbol | |
|---|
| ID | 5694560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2068304 |
|---|
| End bp | 2069356 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641264318 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001529603 |
|---|
| Protein GI | 158521733 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0575415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGC CTCTTCCCCC GCTTGACGTC TGGTACTGCT GTGATCAGAC CCTTTGCAAT
TTCAACTGCC CGTATTGCGC CGCCGGTCTT GTTCGCTCCG CCCATAAAGG TAAAATGTGG
GCCGGTAATG AGAGCGCCGC TCTTTATAAA AAGGTAATAG AGTGGATCGC CGCGCAATCC
GGTTTTGAAA AAGGGGTGCG GCTGCAGACC TTTGGGGAGC CTTTTCTCTG TGACGCGTTT
CTCGAAGGTG CTGCATGGCT TTCCCACCGG GCCAACATCC GTTTTGTCGA ACTGGTCACC
AATGGTTCAA GGCTTTTACA GGAGTATGGG CCATTTGCCG AGCGGGCCGA AGCAGACAGG
ATTACGTTGT GGATTACCTA CCATGCAACC GAGTGCGACG CGGAAACAAT TTTAAAGGGC
GCGCTTTTCG CCCAATCCCT TGGCGCGCTT GTGATTATCA ACCTGCTGTT GTTTCCCCAG
ACACTGCAAG CCGTTCTGGT AATGCGGGAT CGCTGCCTGG AAGAAGGGCT GAAGGTCCAT
GTTGACCTGG GGTATCTTCA ACAGAATATT CCGATTGTGC ATGAACGGCC GGATATTGTC
TCCCGGCTCT ATCAATGGCC GGATGTGCTG GCCATGCACC TGACCGCCGC CATAACCCCT
TTTGGCCAGG CGTGTCACGC GGGCCAAGCC TTTATCCGTA TTCTTGAAAA CGGTTATGTT
GCGCCATGCG GGCCCCTGGG GCAGGGTGCC GGTCATCCCG TTCGTTTTGG CCATGTTCTG
GACCCGGATT TTCATCTGGC AGAAAGTTTA TACAAAACGC CAAAAGCATG CACGCACAGG
GCAGCGTGCC GGTGTAAGGA GGAGTTTTTA AACTTTGCGG TGCTTCAGAA AAAGTATGTG
CGGCAGCGCA GCATGGGGCT GGTGGAGCCC AGAGATCCCG GACCCGCAAC AAATGACACG
GACGCCATTG TCGGCCTGGG GGCCGCGGGG TTAAAACTCA AAAAAGCATT GATCCATCAC
CATCGTTTAA CACCGCCAGG GTCCGGGCAA TAA
|
|---|
| Protein sequence | MTTPLPPLDV WYCCDQTLCN FNCPYCAAGL VRSAHKGKMW AGNESAALYK KVIEWIAAQS
GFEKGVRLQT FGEPFLCDAF LEGAAWLSHR ANIRFVELVT NGSRLLQEYG PFAERAEADR
ITLWITYHAT ECDAETILKG ALFAQSLGAL VIINLLLFPQ TLQAVLVMRD RCLEEGLKVH
VDLGYLQQNI PIVHERPDIV SRLYQWPDVL AMHLTAAITP FGQACHAGQA FIRILENGYV
APCGPLGQGA GHPVRFGHVL DPDFHLAESL YKTPKACTHR AACRCKEEFL NFAVLQKKYV
RQRSMGLVEP RDPGPATNDT DAIVGLGAAG LKLKKALIHH HRLTPPGSGQ
|
|---|
| |