| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1676 |
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| Symbol | |
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| ID | 5694513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1994060 |
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| End bp | 2000629 |
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| Gene Length | 6570 bp |
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| Protein Length | 2189 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641264271 |
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| Product | polyketide-type polyunsaturated fatty acid synthase, PfaA |
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| Protein accession | YP_001529557 |
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| Protein GI | 158521687 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase
[TIGR00517] acyl carrier protein
[TIGR02813] polyketide-type polyunsaturated fatty acid synthase PfaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAAAG AGGGCGGCAT CGACAACCAG GCAGTGGCCG TTGTGGGCAT GGGAAGCCTG
TTCCCCCTGT CCGCCAGCGT AAAGGAATAC TGGCGCCTGA TCTCCCGTGG TGAGGACGCG
ATTACGGATG TACCTTCCAC CCACTGGTCG GCGGAAGATT ATTTTCGCCA GGATTCCAAA
GGCGGCGATT TTACTTACTG CAAACGGGGC GGGTTTCTCT CCGCCATTGA TTATGATCCC
ACTGAATTCG GCATTCCCCC CACCATCCTG GAAGCCACGG ATACGGCCCA GCTGCTTTCC
CTGGTGGTCA CGAAGATGGC TTTGGAGGAT GCCGGGTACG GCGACACCGG CCGGGCCTGG
AACCGGGAGC GCACCGGCGT GGTGCTGGGC GCCACCGGCA CCCAGGAGCT GGTGGTTCCC
CTGGCCTCGC GCCTGGGGTT TCCCTTCTGG AAAAGGGCGC TGGAGGATGC CGGTGTACCG
GCGGAGGTGG CCGACGACGT GATGGCCCGC ATCTCCGACG CCTATGTGGC CTGGCAGGAG
AACTCCTTTC CCGGCCTGCT GGGAAACGTG ATCGCCGGCC GCATCGCCAA CCGGTTCAAC
CTGGGCGGTA CCAACTGCGT GGTGGACGCA GCCTGCGCCA GTTCCCTGTC GGCTGTCAAC
CTGGCGGTTC TTGAACTCTT GTCCGGAAAA AGCGACATGA TGCTCACCGG CGGAGTGGAC
GCGCTCAATG ATATTTTCAT GCACATGTGC TTTGCCAAGA CCTCTGTACT CTCCTTTAGC
GGAGACGCCA AGCCTTTTTC AAAGGATGCC GACGGCACGG TTTTGGGCGA AGGCATCGGC
ATCGTGGTAC TCAAGCGCCT GGCTGATGCC GAGGCCGACG GAGACAGAAT CTATGCCGTG
ATCCGGGCCA TGGGCACCTC CAGCGACGGC CGGTCGGCCG GCATCTACGC GCCCGTGGCC
GAAGGTCAGC TACGGGCCCT GCGGCGGGCC TATAACGATG CCGGGTTTTC GCCGGAAACG
GTGGCGCTGA TCGAGGCCCA CGGCACCGGC ACCCGGGTGG GAGACGCCGT GGAGTTTGAG
GCCCTGAAGA CCTTCTTCAA TGAGTCGGGC GTTGAAGGCA AAGACCGGTG CGCCATCGGT
TCGGTAAAGT CCATGATCGG CCACACCAAG GCAGCGGCCG GCGCCGCCAG CCTGATCAAG
GCATCCCTGG CCCTTTACCA CAAGGCGATT CCCCCCACCC TCAAGGTGAC CGAGCCTGAT
CCCAAAATCA ATATCGACCA GACCCCTTTT TACATCAGCA CCAGCTTGCG GCCCTGGCTT
TCCACAAAAA AACACCCCCG CCGGGCCGGC TTGAGCTCAT TTGGTTTCGG GGGCAGTAAC
TTTCATGTGG TGATGGAAGA GTACAAAGCG GAAAAAGAGA CGCCTGCCTG GGACGGTTCA
GTGGAGATCG CGGCCTTTTC CGGGGACTCG GCCGCGGATG TTCAGGCCGG GCTGAAGACC
TTCACAGAGG GCGTGGAGGC CCATGCGGCA AAGGCGGGCG GGCGGTTTGC CGGTGTGCGG
GTCACCGCCT TTAAAACAAG GGAAACCTTT TCTCATGCCC ATGCCTGCCG CCTGCTGATG
GTTATTGAAA GAACCGATGA CGTGGCTGAC CTTCTGCAAA AGGCCATGGC CGCCGTCACC
GGCGGCGATG CCGCGGCGGC GGATGGCAAA AAGATTTTTT ACGACACCGA AGCCGGTCAT
GCCGGCAAGG TCGCTTTTAT TTTTCCGGGC CAGGGCAGCC AGTATCCTTA CATGGCAAGA
GACCTGGCCG TGGCCTTTCC CGAGGCCCAC GCGGTGTTTG AAACCGCGGA CATTCAGTTT
GCCAACCTGG GGGCCGCCCC GGACATTCGG CTTTCGGACC GCGTTTTTCC GCCGGGTCTG
TTTGAGAAGG ATAAAAAGAG CACGGAAGAG GCGTTGCGAA ACACCGATTT CGCCCAGCCG
GCCATTGGTG CGGCCAGCCT GGCCACAAAC AAGGTGCTTG CCCGGTTCGG CTTGTGTCCG
GACATGACCT GCGGCCACAG CTTCGGAGAA CTGTCCGCCC TGTGCTGCGC CGGATGGATG
GATGAGGAGA CGTTTCTCTC CCTGGCCGCG GCCCGGGGAA AATACATGGC CGCCGCCGGA
AAAGAAAAAG GCGCCATGCT GGCCATCAAG GCCGACCTGG CCAGAATTGA ACAGTTTATC
GCCGACAACG GTCTGGACCT GGTCCTGGCC AACCGGAACA GCTATGAGCA GGGTGTGCTG
TCGGGCCGTG AGGCGGAGAT CGACCGGGCC GCTGAGTTGT GCAAGAAAGA CAAACTCAGG
GCCACCAGGC TGACCGTGGC TGCGGCCTTT CATACCGAGT TGGTTCAGGA CGCCGCCAAA
CCTTTCAAAG ACTACCTGAG GAAAAAAGAT ATAACTTGTT CTGATATAAA GGTTTTTTCA
AACGTCACCG CCCAGCCGTA TCCTCGTGAT CCCGCAGAAA CCAGAAAGAT TCTGGGCAAT
CAACTGCTCA ACCCGGTCAA TTTCGTGGAA GAGGTCGAGA ACATGTATGC CGATGGTGCC
CGGACCTTTC TGGAGGTCGG CCCCAAGTCG GTGCTCACCG GGCTGGTCAA GTCAATTCTA
AAAGGAAAAC ATTTTGACGC CCTGGCCACG GACGGGTCCG GAGGCCGGAA TTTCGGCCAG
ACCGATCTGG CACGGGTAAT CTGCTTTTTC GCGGCCCAGG GTCGGCCCGT GCGGCTGACC
GAATGGGAAA TACCGCCTGT CCAGGCCCGC CAGCAGAAGA TGTCGCTTTC CATCTGCGGT
GCCAACTATC GCAAGGAAAA ACCGGCCCGC CCCAAACGGG CCCCCATGGT TCAGAAAACA
GAGCCGGTTC CTGTAGCGGC TTCCGGCCTC CAGACAGCCC CGGCATCAGC CGCGCCACCC
CCGGGGCCTG ACACCGACCT GGTGAAAAAC GCGCTTGCCG TGGTGTCGGA AAGCCTGCGC
TCCATGCAGG CCCTTCAGCA GCAGACCGCC GATGCCCACC AGAAATTTCT GGAGACCCAG
ACCGAGGCGG GAAAGGCCCT TGGCATTGTA CTGGAGAAGA CCCGTAGCCT GGGTCAGACC
GTGATGGGCG AAGATGGTGT GGTTCCGGCC GTTCCCATTA AAAGGTCAGC ACCATCGGCC
CCTGCTGTAA GACCTGAGGC CACGCCTCCT TCCGAACCGA AGGCCGCCAT CCCGGCCGCG
GCCCCCAAAA CCCCTGCCGG GCAGTCGGTG GATATTGCCG CAATCGAGGC GGCCATGCTG
GACATTGTGA GCCGGGTTAC CGGCTATCCG GTGGAGATGC TGGGCCTGGA AATGGACATT
GAAAACGACC TGGGCATTGA CTCCATCAAG CGGGTGGAAA TCCTGTCGGT GTTTGAAGAA
GAGCACCCGG ACATTCCATC GGCCACCCCT GAAGACCTGG CCGAGATGCG CACCTTAAAG
GAGATCTGTG ATCACCTGGT ATCTCTTTCC GGTGCCGTGG CAGGAACGCC ATCGGCTGCT
CCGGCTTCGG CTGCCGCCCG GGCCTCATCA GCGGATATCG AGGCGGCCAT GCTGGACATT
GTGAGCCGGG TTACCGGCTA CCCGGTGGAG ATGCTGGGCC TGGAAATGGA CATTGAAAAC
GACCTGGGCA TTGACTCCAT CAAGCGGGTG GAAATCCTGT CGGTGTTTGA AGAAGAGCAC
CCGGACATTC CATCGGCTAC GCCAGAAGAC CTGGCTGAGA TGCGCACCTT AAAGGAGATC
TGTGATCACC TGGTATCTCT TTTCGGTGCC ATGGCAGGAA CGCCATCGGC GGCTCCGGCT
TCGGCTGCCG CCCGGGCCTC ATCAGCGGAT ATCGAGGCGG CCATGCTGGA CATTGTGAGC
CGGGTTACCG GCTACCCGGT GGAGATGCTG GGCCTTGAAA TGGACATTGA AAACGATCTG
GGCATTGACT CCATCAAGCG GGTGGAAATC CTGTCGGTGT TTGAAGAAGA GCATCCGGAC
ATTCCATCGG CCACCCCTGA AGATCTGGCC GAGATGCGGA CGCTAAAGGA AATCTGCGAC
CACCTGATGA AACTGGGCGG GATTCAGACG ACCCCGGCCG GGGATAAGCC AGCCCCGGCC
GTTACAGCGG AACCCCCTGA GGATACCGCC GATTCATCCG GGCCGGTGTT GCGCCGGGTC
ATTCAAATGG AGAGCCTGCC GCCGGACAGC CAGCCGCCCC TGGCGCTGGC AAAAGGCAAA
ACCCTGTTTG TCTGCACAAC CGACGCATCA TGGGGCAGGG CGGTGGTCGA GGCGTTGATG
GCCATGGATG TCAATGCCGC GCTCCTGGAA AACGTTTCCC CTGAGCAGGA TGTTTCAAAT
GCCGGCGGCC TGTTGATCCT GGGCGGCCTT GACCCCGCGG AAAAGCAGTT ATGGCACCCG
GAAGATGAGC GGTTTGTCAA GGACGCCTTT GCCCTGGCCG GCCGCGTGGG GCCGGTGCTG
ATCGACGGTG TCAAAAAGAA CCAGGTCGGT ATTTTTGCCG CCGTCACCTT TCTGGACGGC
CAGTTGGGTT TCGGCAGGAC CCGCGCGTTT AATCCCATGC AGGCGGCCCT GGCCGGGCTG
GTGAAAACCG CGGCCATTGA ATGGCCGGGC GTGACCTGCC GGGTGATCGA CCTTGATCCC
GAATGGACCG ACGTAAAGGC GGCGGCCCAT GCCGTGGCAA TGGAGATTTT AAGCGCTGAA
GACCCGGTTG AAGTGGGGCT TTCAGTGGAA GGCAAAAAAG GTGTTGCCCT GGCTGCGGCT
CCCTGCGAAC CCGAGGACCT GCCGCTTAAG TCCGGCGACG TGGTGGTGGT ATCCGGCGGT
GCCCGGGGTG TTACCGCCCA GTGTGCCCTG GCCCTGGCAA AAAAGGTTCG GCCCGTGTTG
GTGTTGCTGG GCCGGTCCCC GCTGCCCGGG CCTGAGCCGG CCTGGCTGGC CGGTGTGACC
AGCGAGCCGG AGATCAAGAA GCAAATCCTG GAAAATGAAT TTTCCGGCAA AACCGCCACC
CCGGCTGAAG TGGACCGGGT TTTTAAAAAG CACATGGCCG GTCGGGAGAT CGCGGCAAAC
ATGGAAGCCC TTCGGGCCGT ATGTACCGAG GTGGTGTATC GCTCCACCGA TGTGCGCGAT
GATGCGGCCG TGGAAGACCT GTTCAAAGCG GTCAGCGAAA AATTCGGGCC GGTGCGCTGT
ATTGTCCACG GCGCCGGGGT ACTGGAAGAC CGGTTTATCA TTGACAAGAC CGCCGACCAG
TTCGACCGGG TGTTTGATAC CAAGGTGGCC GGGGCAAAGG CCCTGGTTTT GGCGGCGGAC
ATGAAGGCGC TGCGGTGCCT GGTCTTTTTT TCTTCGGTGA GCGCCCGTAT GGGCAACAAG
GGCCAGGCCG ACTACGCCAT GGCCAATGAG GTACTCAACA AAACAGCCCA GTTGATGGCC
CTGCAAAACC AGGGATGCCG GGTAATCTCC TTTAACTGGG GACCGTGGGA CGGGGGCATG
GTGACCGCCT CGTTGAAACG GGAGTTTGAA AAGAGCCGTG TAGCCCTGAT TCCCCTGGCC
GCCGGGGCCC GGTGCATGGT GGAGGAGATG GCTTCGCCTG CCGGTGACGT TGAGGTGGTG
ATCGGCGCCG GGTTTGATGA TGTCGGCAAG GCCACCCCGG AAACCAGCCC CGCTCCGGCA
CCCGCAAAAA AAGAGGTCGA GAACACGGGC CCGCTTTTTG AGGCCTTTAC CCGCAAAGTG
GATGTGGAGG AGTTCCCGGT ATTAAAGTCC CACCTGCTGG ACGGCAGGCC GGTGGTGCCC
TTTGCCCTGG CCGCCGAGTG GGTGGGCAGC GGCGCCCTGC ACGCCAACCC CGGCCTGATG
CTGATCGGCA TCGACGACAT GCGGGTGCTG TCCGGCATCA AGGTTGATGA AACCGGCCGC
ACCGTTACAG TGCTGGCTGG AAAGCCGATC AAAAGCGGGA CCGCCTTTGA AGTGGCGGTG
CAGATAAAAA GCGACAGCAG CGGAAAGGAG ACGGTGCACT ACGGGGCACG GGCCGTTCTT
GCCGCCGCCT ATGAAACGCC CCCTGTGTTT ACGGAACCCG CCTCGCTTGC CTCTTCCGGT
TATACCCGCA CCGCAGCCGA GCTCTACGAT ACGGTCCTGT TTCACGGCAA GGCCCTTCAC
GGGCTTCAGG AAGTGGTGGC CTGTTCAACG GAGGGAATCA AGGCAACCAT CAGCAGCGCG
CCTTCTCCCA AGCAGTGGAT TCGCCGGCCG GTCCGCAACA CCTGGCTGGC CGACCCCCTG
GCCCTGGACA CGGCCTTTCA GATGGCCATT GTGTGGTGCC ACGAACAGGC GGGCATGGTC
TGCCTGCCGG TCTCTTTTAA ATCCTTTCGG CAATACCGCA CCGCGTTTCC CGCCGAGGGC
GTAACCGCCG TCCTGGCCGT CACCAACCGG ACCAGCCGCA AGATGCGCGG GGATGTCTTT
TTCCTGGATG AGAACGGCGC CATGGTGGCC TGCATGACCG GGTTTGAAGC GGTAATGGAC
AAGTCGCTGG GCGCGGCCTT TAAATCATAA
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| Protein sequence | MKKEGGIDNQ AVAVVGMGSL FPLSASVKEY WRLISRGEDA ITDVPSTHWS AEDYFRQDSK
GGDFTYCKRG GFLSAIDYDP TEFGIPPTIL EATDTAQLLS LVVTKMALED AGYGDTGRAW
NRERTGVVLG ATGTQELVVP LASRLGFPFW KRALEDAGVP AEVADDVMAR ISDAYVAWQE
NSFPGLLGNV IAGRIANRFN LGGTNCVVDA ACASSLSAVN LAVLELLSGK SDMMLTGGVD
ALNDIFMHMC FAKTSVLSFS GDAKPFSKDA DGTVLGEGIG IVVLKRLADA EADGDRIYAV
IRAMGTSSDG RSAGIYAPVA EGQLRALRRA YNDAGFSPET VALIEAHGTG TRVGDAVEFE
ALKTFFNESG VEGKDRCAIG SVKSMIGHTK AAAGAASLIK ASLALYHKAI PPTLKVTEPD
PKINIDQTPF YISTSLRPWL STKKHPRRAG LSSFGFGGSN FHVVMEEYKA EKETPAWDGS
VEIAAFSGDS AADVQAGLKT FTEGVEAHAA KAGGRFAGVR VTAFKTRETF SHAHACRLLM
VIERTDDVAD LLQKAMAAVT GGDAAAADGK KIFYDTEAGH AGKVAFIFPG QGSQYPYMAR
DLAVAFPEAH AVFETADIQF ANLGAAPDIR LSDRVFPPGL FEKDKKSTEE ALRNTDFAQP
AIGAASLATN KVLARFGLCP DMTCGHSFGE LSALCCAGWM DEETFLSLAA ARGKYMAAAG
KEKGAMLAIK ADLARIEQFI ADNGLDLVLA NRNSYEQGVL SGREAEIDRA AELCKKDKLR
ATRLTVAAAF HTELVQDAAK PFKDYLRKKD ITCSDIKVFS NVTAQPYPRD PAETRKILGN
QLLNPVNFVE EVENMYADGA RTFLEVGPKS VLTGLVKSIL KGKHFDALAT DGSGGRNFGQ
TDLARVICFF AAQGRPVRLT EWEIPPVQAR QQKMSLSICG ANYRKEKPAR PKRAPMVQKT
EPVPVAASGL QTAPASAAPP PGPDTDLVKN ALAVVSESLR SMQALQQQTA DAHQKFLETQ
TEAGKALGIV LEKTRSLGQT VMGEDGVVPA VPIKRSAPSA PAVRPEATPP SEPKAAIPAA
APKTPAGQSV DIAAIEAAML DIVSRVTGYP VEMLGLEMDI ENDLGIDSIK RVEILSVFEE
EHPDIPSATP EDLAEMRTLK EICDHLVSLS GAVAGTPSAA PASAAARASS ADIEAAMLDI
VSRVTGYPVE MLGLEMDIEN DLGIDSIKRV EILSVFEEEH PDIPSATPED LAEMRTLKEI
CDHLVSLFGA MAGTPSAAPA SAAARASSAD IEAAMLDIVS RVTGYPVEML GLEMDIENDL
GIDSIKRVEI LSVFEEEHPD IPSATPEDLA EMRTLKEICD HLMKLGGIQT TPAGDKPAPA
VTAEPPEDTA DSSGPVLRRV IQMESLPPDS QPPLALAKGK TLFVCTTDAS WGRAVVEALM
AMDVNAALLE NVSPEQDVSN AGGLLILGGL DPAEKQLWHP EDERFVKDAF ALAGRVGPVL
IDGVKKNQVG IFAAVTFLDG QLGFGRTRAF NPMQAALAGL VKTAAIEWPG VTCRVIDLDP
EWTDVKAAAH AVAMEILSAE DPVEVGLSVE GKKGVALAAA PCEPEDLPLK SGDVVVVSGG
ARGVTAQCAL ALAKKVRPVL VLLGRSPLPG PEPAWLAGVT SEPEIKKQIL ENEFSGKTAT
PAEVDRVFKK HMAGREIAAN MEALRAVCTE VVYRSTDVRD DAAVEDLFKA VSEKFGPVRC
IVHGAGVLED RFIIDKTADQ FDRVFDTKVA GAKALVLAAD MKALRCLVFF SSVSARMGNK
GQADYAMANE VLNKTAQLMA LQNQGCRVIS FNWGPWDGGM VTASLKREFE KSRVALIPLA
AGARCMVEEM ASPAGDVEVV IGAGFDDVGK ATPETSPAPA PAKKEVENTG PLFEAFTRKV
DVEEFPVLKS HLLDGRPVVP FALAAEWVGS GALHANPGLM LIGIDDMRVL SGIKVDETGR
TVTVLAGKPI KSGTAFEVAV QIKSDSSGKE TVHYGARAVL AAAYETPPVF TEPASLASSG
YTRTAAELYD TVLFHGKALH GLQEVVACST EGIKATISSA PSPKQWIRRP VRNTWLADPL
ALDTAFQMAI VWCHEQAGMV CLPVSFKSFR QYRTAFPAEG VTAVLAVTNR TSRKMRGDVF
FLDENGAMVA CMTGFEAVMD KSLGAAFKS
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