| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1671 |
|---|
| Symbol | |
|---|
| ID | 5694508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1987119 |
|---|
| End bp | 1987769 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641264266 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001529552 |
|---|
| Protein GI | 158521682 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3453] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01244] conserved hypothetical protein TIGR01244 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACG CCAAGAAATT TAACGATCGA ATTACCTTAG GGCTGGTTCC AAGTGCAGAA
GACATCAAAC AGCTAAAGGA GTTGGGATAC AAGACGATTA TTGACCTTCG AGACAACCAG
GAGCTTTTTG GCGGCCTTGT TGCAAAAAGG GCAAAAGAGG CCGGTCTGAC CTACATTCAT
ATCCCGGTTC AGCGGGACGC CATTCAGCTT GAGGATGTGA AGGCGTTTTA TCGGGCGGTG
TATGCCAGGG GAAGCGCACC TTTATATGTG TTTTCCCGCC TGGGTCGTAA GCCCCTGGTC
TTTGTGCTCC TGTTTGATGC GGTAGCGCAA AGCAAGTCGC TGGTGAGGAT TTATCGACAG
GCCAACAGGC TTGGTTTTCA CCTGGAGTGT GACTTCCCGA TGCAGACCTT TCTGTACAAC
CTCTACAATT CAGGGGAGTT CAGGGAGATG GTGGACGAGA TTCGCCGGTC CCGTTCCGAT
CTTTTTGAAT CACTCGCGCC GTCGCCGCAT CAGGTTGAGG AGGAGTATGA CTTTGGTGTG
GACGCCGTCA CTGAAAAACT GCTTCAGATC ACCAGCACCT ATTCACAGAC AAAAGACAAT
GCCATGCTGC AGAAGGCCCT GGCCGATCTG TTGGCGACTG TAAAAAGGTA G
|
|---|
| Protein sequence | MQNAKKFNDR ITLGLVPSAE DIKQLKELGY KTIIDLRDNQ ELFGGLVAKR AKEAGLTYIH
IPVQRDAIQL EDVKAFYRAV YARGSAPLYV FSRLGRKPLV FVLLFDAVAQ SKSLVRIYRQ
ANRLGFHLEC DFPMQTFLYN LYNSGEFREM VDEIRRSRSD LFESLAPSPH QVEEEYDFGV
DAVTEKLLQI TSTYSQTKDN AMLQKALADL LATVKR
|
|---|
| |