Gene Dole_1588 details

Gene Information

• Locus tag: Dole_1588
• ID: 5694425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1890684
• End bp: 1891409
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641264183
• Product: type IV pilus assembly PilZ
• Protein accession: YP_001529469
• Protein GI: 158521599
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG5581] Predicted glycosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0447355
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAAG GTGAACTGCT GACAGGCCAG GAAGCGAGGG AGATTCTCAG GGACCTGAGG 
AAGAACAGCA CCATTCTCCA GATGCACCTG AAAGGCACCC ATTTCAAGAA ATTGACCGTT 
GTTACGGCTA TTCAGCCAAA ACCCGGCCGG CCCCTTCTTT ATGTGGATCA CCCGCCCGGG 
TTTGCCAAGG CGGCAGAAGG CGTCGATAAC TGGGAAATCG CTTTTACCTT CACCGGCGCC 
CACGGCATTC CATACAGTTT TACCACATTT GGCGGCTTTT TCAGGGAAGA AGACAACACG 
ATTGCGGTGG AGGCACCGGA GGCGGTTGAA CGCAAACAGC GGCGCAAGCA CCTGCGGGTC 
AAGCCGCCGG TGGGGACCGT AACAACCGCT ATTATTGACG GCGAGGGATA TGATATCCAG 
ATTGTGAATA TCAGCCTGGG CGGGGCACTG GTGATGTTCT CCAGCCCCGC CATAAAAGAA 
GACGTGGTCA AGCGGGGCCA GGAAGTAAAG GATATCACCA TCGACCTGTT TCCCGGTAAA 
GCGGGCAAGG AACCGGTCAA GGTGGACCGG GCCGTGATTC GGCGAGTGAT CACCGAGCAT 
GTGACCAGCA AACAGCATTA CGGCCTGATG TTTATCGACA TGGCACAGAA CGAGACCCTG 
CGGTTGAAGG ATTACATCTA TGTCAACCAG CGGCTGATGC TGCGCAAGGC ACTTATTCCC 
TCCTGA 

 

Protein sequence

MAEGELLTGQ EAREILRDLR KNSTILQMHL KGTHFKKLTV VTAIQPKPGR PLLYVDHPPG 
FAKAAEGVDN WEIAFTFTGA HGIPYSFTTF GGFFREEDNT IAVEAPEAVE RKQRRKHLRV 
KPPVGTVTTA IIDGEGYDIQ IVNISLGGAL VMFSSPAIKE DVVKRGQEVK DITIDLFPGK 
AGKEPVKVDR AVIRRVITEH VTSKQHYGLM FIDMAQNETL RLKDYIYVNQ RLMLRKALIP 
S