Gene Dole_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1566 
Symbol 
ID5694403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1864591 
End bp1865382 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content57% 
IMG OID641264161 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_001529447 
Protein GI158521577 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACA TTCTGACACA GATCGTACAG ACAAAAACCG AAGCGGTCAC TGCGGCCCGG 
CTTCGCGTAC CGGAAGCTGA ATTAAAGGCC ATGGCCGGGG ACCGGGATTC AAAAAGGCCC
TTTGCCGAAA ACCTGCGACA GGTCCATGCG CAGGGCGGGA CTGGCATCAT CGCGGAGATC
AAGCGGGCCT CGCCTTCCAG GGGAATCATT CAGGCCGATC TGGATCCTGC CGACTGTGCC
GCAAAATACG AGGCCGGCGG GGCCGCGGCG ATTTCGGTGC TCACCGACGC GCCCTACTTC
AAAGGTTCCC TTTCCGACCT GAAGCAGGCC CGCAAGGCCT GTTCCCTGCC GGTGTTAAGA
AAAGAGTTTA TTCTCAGCGA CTACCAGGTT TACGAGTCAG CGGCAGCCGG GGCCGATGCC
GTGCTCCTGA TCGTAAGGAT TCTGACCCAA ACCATGCTGT CCGATCTTAT CGGCCTGTGC
AGGGCGCTGG GCCTGGACAC GTTGGTGGAA ATCCATGATG AAAACGACCT TGAGACTGCC
ACAAACGCGG GCGCAAAACT GATCGGCATC AACAACCGGG ACCTGAAAAC CTTTAAAACC
GACATTGCCG TGGCCACCCG GCTGGTTTCA AATTTCGGGC CGGACCAGGT GCCGGTGGCG
GCCAGTGGCA TTGGTTCACG GGAAGATATC GAGCGGACAA AAGCGGCCGG TATATATAAC
TTTCTGATCG GCGAAAGCCT TGTCCGGGCG GAAGATACGG TGAGCTTTCT GAAACAGCTT
TTAACAACAT AA
 
Protein sequence
MADILTQIVQ TKTEAVTAAR LRVPEAELKA MAGDRDSKRP FAENLRQVHA QGGTGIIAEI 
KRASPSRGII QADLDPADCA AKYEAGGAAA ISVLTDAPYF KGSLSDLKQA RKACSLPVLR
KEFILSDYQV YESAAAGADA VLLIVRILTQ TMLSDLIGLC RALGLDTLVE IHDENDLETA
TNAGAKLIGI NNRDLKTFKT DIAVATRLVS NFGPDQVPVA ASGIGSREDI ERTKAAGIYN
FLIGESLVRA EDTVSFLKQL LTT