Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1500 |
Symbol | |
ID | 5694337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1790776 |
End bp | 1791849 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641264095 |
Product | diguanylate cyclase |
Protein accession | YP_001529381 |
Protein GI | 158521511 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGCG TTTTCCAAAA AGGTGATACC AGGCAGGCAT TGCGAATACG CCGGACGTTG ATGGCTGTTG CCAGTTATCT GTTCATCGGT GCGGGATGTT ACCTGGGTGT TCATTTAGGA TATGCCCGGG ATCTGGAACT CAGCGTTATT TTGATCATCA CGACGGGGGT GTCGGGTATC TACCTCATCA TACTGACGAT GATGTATAAA GGCATTAATG AACGGTTCCG TGACCCCAGC CTCACACTGT TCCAGATTTT ATGCGGCATT ATGTTTATCA CACTTATTGC CTACTACATG GTCGACCGGA TACGCGGGAC CGCCTCGGTT CTTTATATCC TGGCATTCAT GTTCGGCACC TTCCGGCTCC GGCTGAAGGA TTTGCTGGTA CTTACGGGCA TAACCGGCGG GCTTTATGCC GGGGCCATGG CGTTGCTGCA TTCTTCGGAT CCCGGGGCGG TTGATCCCCA GCTGGAGGTC ATGCGGTGGG TCATATTGAT GATGGCCCTG GTCTGGGTTT CCTATATGGC CAACTACATC TCCAAGCTCC GGCGGCACAT CACCCGTCTT GCCACTCATG ACGCCCTGAC CGGGGTGTTG AGCAGAAGAG AGATTTTCGA GGTGCTGGGC AGGGAAAAAG CCTTTTCAGA CCGGGCGGGT ACCCCGTTTT CGCTGTGCAT GCTTGACCTG GACGATTTTA AGCAGATGAA TGACACTTAC GGTCATCAGG CCGGCGATGC GGTGCTCCAG TCCTTTGCCC GGGCCTTGAA AGACAATACA CGGGCCACGG ATTATGTGGG ACGGTATGGT GGGGAGGAGT TTATGGTGGT GTTTTCCAAC TTCCAGTGCC TGGACAGCAG GGCAAGTGGT GTCCAACGGC TGCTGGCCGC CACACGGAAT ATTTGCCTGC CGGATATTTC CCCGGATTTG AGAATCACCA CATCAATCGG TATTGCCGCC TACCAGCCGG GCGAATCCCC GGATGCGCTG CTTGCAAGGG CGGATGCCGC GCTTTATGAA GCCAAGGAAA ACGGCAAGGA CCGGGCCGTT TTCAAAGAGC CGGGGACCGA TTAA
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Protein sequence | MISVFQKGDT RQALRIRRTL MAVASYLFIG AGCYLGVHLG YARDLELSVI LIITTGVSGI YLIILTMMYK GINERFRDPS LTLFQILCGI MFITLIAYYM VDRIRGTASV LYILAFMFGT FRLRLKDLLV LTGITGGLYA GAMALLHSSD PGAVDPQLEV MRWVILMMAL VWVSYMANYI SKLRRHITRL ATHDALTGVL SRREIFEVLG REKAFSDRAG TPFSLCMLDL DDFKQMNDTY GHQAGDAVLQ SFARALKDNT RATDYVGRYG GEEFMVVFSN FQCLDSRASG VQRLLAATRN ICLPDISPDL RITTSIGIAA YQPGESPDAL LARADAALYE AKENGKDRAV FKEPGTD
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