Gene Dole_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1450 
Symbol 
ID5694287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1727951 
End bp1729375 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content62% 
IMG OID641264045 
ProductGTP-binding protein HSR1-related 
Protein accessionYP_001529331 
Protein GI158521461 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC CCGCGATTCC AACCTTTGCC GTGCTGGGCC ATCCCAACGA GGGAAAATCG 
TCGGTGGTCT CCACCCTTAC CGAGGATGAT TCGGTCCGCA TCAGCCCCTT TCCCGGAGAG
ACCACGGTGT GCCGCCACTA CCCGGTCACC ATCGACGGCC GGGAGATTCT GCGGTTTGTG
GACACGCCCG GGTTTCAGCA ACCCAGAAAA ACCCTGGAGT GGCTGGCCGC CTTTCAGGGG
CCGCCCGCGG ACATGGCCGC CGCCTTTATC GCGGCCCATA AGGACAATCC CGATTTTTCC
CACGAGACCG AGCTGTTTTC TCCCCTTGCC AAAGGCGCGG GCATCGTGTT CGTGGTTGAC
GGCTCCCGGC CCCTGCGCCG GGTGGATATC ATGGAAATGG AGATACTGCG GCTCACCGGC
CTGCCGCGCA TGGCCGTGAT CAACACCAAG GAGCACCACC GGGCCGAGTT TTTGGACGAC
TGGAAACACG AGGCCCGCAA ACACTTTAAC ACCGTGCGCC TGTTTGACGC CCACCGGGCC
ACCTGTGCCG AGCGGATCGA CCTTCTGGAA AGCCTCAAGC ACATCGACCC GGAGTGGCAG
CCCATGCTCC AGGAGGTGAT TGCTGCTTTT AAAAACGACT GGCAGGGCCG CATCAACCGC
GCGGTAACCG TCATTCTGGA CCTGCTGGCC GGGGCCGCCC GCCATGTTGT CAGCGACACC
TGCGGCGACG AGTCCCAGGC ACCCCACACC CGCACAAAAC TGGAGACCCG GTACCGGACC
GACATTCAGA AAATGGAAAA AGCGGCCCTG CAGGAGATTC GAAAGCTGTT CAAGCACAAC
CTGTTTGACG TGGAACTGCC GCCCCACTCC ATCGTCAACG AAGACCTGTT TTCAAAAAAA
GCGTGGCATG TTCTGGGCCT TGGCCAGTGG CAGCTGGCCG CTGCCGGCGC CGCCGGCGGC
GGCATTCTGG GCGCGAACAT CGACCTGGCC CTGGCCGGCC ACAGCCTGGG CGCCTTTACC
GCCATTGGCG GGCTCCTGGG CGGCGGGTCG GCCATTTTCG GGGCGCGCCG GGCCTTTAAC
GCCCGGGTCA AAGGACTGCC CCTGGGCCGC CTGAAAGTGG AGGTGGGCCC GGTCAAAACC
GACCAGATGC TGTTTATCCT TTTGGACCGC GCCCTGATCT ATTTTTCCCA TGTCAGCAAC
TGGGCCCACA GCCGCAGGGA ACCGCCACTT CAGGCCCCGG CCCCGGCCGG CCGCCAGGGC
ATCACATCCC AATGGGAAGC CGCAAACAGA AAAGAGTTTG CCCGCTTTTT TGCCGCTGCC
AGAAAAAACG ACTGGCCCGC GCTGGCAGCC TTAAAACCCG TGACCGCGGG CATTTTAGGC
CGCACCCTTC AGGAGCTGTC GGAGCGAAAG ATACCTCTGG AGTAA
 
Protein sequence
MDKPAIPTFA VLGHPNEGKS SVVSTLTEDD SVRISPFPGE TTVCRHYPVT IDGREILRFV 
DTPGFQQPRK TLEWLAAFQG PPADMAAAFI AAHKDNPDFS HETELFSPLA KGAGIVFVVD
GSRPLRRVDI MEMEILRLTG LPRMAVINTK EHHRAEFLDD WKHEARKHFN TVRLFDAHRA
TCAERIDLLE SLKHIDPEWQ PMLQEVIAAF KNDWQGRINR AVTVILDLLA GAARHVVSDT
CGDESQAPHT RTKLETRYRT DIQKMEKAAL QEIRKLFKHN LFDVELPPHS IVNEDLFSKK
AWHVLGLGQW QLAAAGAAGG GILGANIDLA LAGHSLGAFT AIGGLLGGGS AIFGARRAFN
ARVKGLPLGR LKVEVGPVKT DQMLFILLDR ALIYFSHVSN WAHSRREPPL QAPAPAGRQG
ITSQWEAANR KEFARFFAAA RKNDWPALAA LKPVTAGILG RTLQELSERK IPLE