| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1403 |
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| Symbol | |
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| ID | 5694238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1668353 |
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| End bp | 1670149 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641263996 |
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| Product | hypothetical protein |
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| Protein accession | YP_001529284 |
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| Protein GI | 158521414 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG AACAGGAGTT GACCTCCACA GAGCGTCTTT TAAATAAAAT CAAAACCAGT
GCGCCCGAAT CTTCGGCCGC GCCGGCCTCC CGGCCGGATG CGATTCCTTC GGGCCCGGCC
GCCACCTTCC GGCCCCGGCG GACCCCGGCG TTGTCCGCTA CTCTTTTTCC CCGAGCGGCC
AGGAGCGCAC CCACCGGCAT TATCTTCGGC AAGGAAGCCT TTTCCATCGT GACGCCCGGT
ACCGGCGTCG ATGGCGGCGC CTATGTGGCC GATATTCTTA ACATATCCTA TCCGGACGGC
GTCGATATTT TTTCCGAAGG ATTTGGCGAT ATCATTTCCA AGGCCCTGGC CGGTCTGGAT
CCGGCCCGTC GTTCCCGTGT CTGGTGCGTA CTGCCGGACA ACCTGGTGGA CATCCGCTAC
CTCAAGCTGC CCAGAACCAC GGGTGACAAC CTGGCCAATG CCGCCTTCTG GAGTTACAAA
AAAGAGGTGG TGGCCGATGA AAAAGACATT GTGTTTGATT ACGAGGTGCT TGATGAAATA
ACCGAGCGGG GGGTTGCCAA GCTGGGGGTC TGCGCCTACA GCGTTCATAA GGACGTGGTG
GCGCGAACCC GGGAAGTGCT GGAGGGGGCC GGCTGCGTTG TTGAGGGAAT TACGTCCGGG
GCCTTTGCCC TTCAGACCCT GATCAAGAGC CGTGCCCTTC GGCCGGACAT TGAAAACATC
TGCTGCGTTC ACGTGGGCCG GGAGGCGTCG GCCATTCATA TCTTTTCCGG GGCCAGCCTG
ATGCTGGTGA GGCAGATCCG GGCCGGGCTG GCCAGCCTGG CCGAGGCCAT GATGAGCGCC
GGGGAAGGGG AGGAAGTGCT CCATCTTGAG AACGAGGGGC CGGGGGATAC GGCAGTGGAC
CACCTGGTGC GGTACATGCG GGAGATGGGG GACGCGGCGG GAACGGACGC GGACACACTT
TTCCCGGCCC TTGGTCCGGC CGTGGAGCGG ATCGGCCGGC AGGTCGAGCG CACCATCGCG
TTTTTTCGCC AGAACATTCA GCCGGACCGC GTATCGGCCG TGCTGATTCA CGGCGAGGTG
GCCGGATACC GGCCCTTTGT CAGCGCCATT GCTGATCTGC TGGGCATTCC CGTCTACACG
CCCGACGATG TTCTGAGCTC GGACGTCCGG CTGCTCCATG CAAACCATCT CAAGCAGGAG
GCCCAGTTCC TGTTTGGCCT GGGTCTTGTG CGGGCCTCCC TGGCCGTCAC GCCCAATATT
CTTTTTACCG CCACGGACAA GCGGGCCTAT CAGAAGGCCG CCATTGTCAA CAAGGGTGCA
TGGGCCGTTT TTCTTCTGGC CCTGGCGGCC TGTATCGGCA TGGTCTCCTG GCAGGGTCTG
ACCCTGGCGG GCCTGCACAA CGAAAGAGGC CGGCTGGTTC AAGGAACGGA TGCCGGGGCC
GGTGGTCTGG ACCAGGGGGT TTTAACCAGT ATCTCGGCAA AGGTGGAGAG CCAGCAGAAA
GTGCTGCGGG CCAAAACCGC CAAACTGGCC CCCAGGGTGC TGATTCACGA AATGGTGGCG
CTCACGCCGG AAAAGATCAA ACTGTCGGGC ATGACGCTGA GCCTGGCCGA GTCCCGGCAG
ATCGATTTTT CAGGTTATGT GCTGGGCAGC GCGTATGCCC AGGAGTCGGC CCTGGCGGCC
TATGTCATGG ACCTGAGCGC GTCCCCCCTG TTCGAACAGG TCCGGGTGAA CCGCCGCGGC
AAGGCCCAGC TGGACGGACA GGACGTTTTG GAATTTTCGG CGACCATCAC ACTGTAA
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| Protein sequence | MKKEQELTST ERLLNKIKTS APESSAAPAS RPDAIPSGPA ATFRPRRTPA LSATLFPRAA
RSAPTGIIFG KEAFSIVTPG TGVDGGAYVA DILNISYPDG VDIFSEGFGD IISKALAGLD
PARRSRVWCV LPDNLVDIRY LKLPRTTGDN LANAAFWSYK KEVVADEKDI VFDYEVLDEI
TERGVAKLGV CAYSVHKDVV ARTREVLEGA GCVVEGITSG AFALQTLIKS RALRPDIENI
CCVHVGREAS AIHIFSGASL MLVRQIRAGL ASLAEAMMSA GEGEEVLHLE NEGPGDTAVD
HLVRYMREMG DAAGTDADTL FPALGPAVER IGRQVERTIA FFRQNIQPDR VSAVLIHGEV
AGYRPFVSAI ADLLGIPVYT PDDVLSSDVR LLHANHLKQE AQFLFGLGLV RASLAVTPNI
LFTATDKRAY QKAAIVNKGA WAVFLLALAA CIGMVSWQGL TLAGLHNERG RLVQGTDAGA
GGLDQGVLTS ISAKVESQQK VLRAKTAKLA PRVLIHEMVA LTPEKIKLSG MTLSLAESRQ
IDFSGYVLGS AYAQESALAA YVMDLSASPL FEQVRVNRRG KAQLDGQDVL EFSATITL
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