| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1302 |
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| Symbol | |
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| ID | 5694137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1554040 |
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| End bp | 1555107 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263896 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001529185 |
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| Protein GI | 158521315 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.454328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAT TCTCAGACAG ACGTGTGCTG GTTACCGGGT GTTGCGGTAC TGTGGGCAGC
GAGCTGGTCC GCCAGCTGCT GGAGGTCTAC GGCGTTGGCG AACTGGTTGG CATTGACAAC
AACGAAAGTG AGCTTTTTTT TGCCCAGCAG CGGTTTGCCG GCCGGCCGGC CCGGTTCTTT
CTGGCCGATG TTCGGGACGA GGCCCGGCTG AAGCGGCTTT TCTCCGGCAT CGACATCGTG
TTTCACACAG CGGCGTTTAA ACACGTGGAG CTGTGCGAGG TATCGCCCTT TGAGGCGGTG
CAGACCAATA TTCACGGGGT TCAGAACGTG GTGTGGGCCG CTGTTGAAAA CAGGGTCCGA
ACGGTGGTGT TCACCAGCTC CGACAAGGCG GTCAACCCCA CCAACGTGAT GGGCACCTCC
AAGCTGATGG GCGAGCGGCT CATGACAGCG GCCAACAGCA ACCTGCGGTC CGGCAAAACC
GTGTTTGCCG CCACCCGGTT CGGCAATGTG CTGGGCTCCC GGGGTTCGGT GATTCCCATC
TTTCGCGAAC AGATTCGAAA AGGCGGGCCC GTGACCCTCA CCGATCCGGA CATGACCCGG
TTTATCATGA GCATTCGCCA GGCCGTGCAA CTGGTCATTG ATTCCGCGGA TATCGCCAGG
GGCGGGGAGG TGTTTGTCAC CAAGATGCCG GTGATCCGCA TTGAAGACCT GGCCCGGGTG
ATGATTGACG ATCTGGCCCC CCGGTACGGA CATGATCCGG CAGCGGTCAC GACAGAGGTG
ATCGGCACCA AGGCCGGCGA AAAACTCTAC GAAGAGTTGA TGACCGACGA GGAGACCCGC
CGGAGTCTGG AGCTGGCCCG CTATTTTGTG GTGCGGCCTG CGTTCCTTTC TCTTTACCGG
GAAATTGATT ACACCTATGC GGATATGATC AGCGACAGGG TGGACCGGCC TTACCACTCC
GCCAACGAGA CACCGTTGAC CCAGGCCGAG CTTAGGGCTT TTCTGTATGA GAACAACCTC
ATCGAAGGCG AAGCGGCCGA ACCGTTTCAA CCGGCAAAAC GGTTTTAA
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| Protein sequence | MNAFSDRRVL VTGCCGTVGS ELVRQLLEVY GVGELVGIDN NESELFFAQQ RFAGRPARFF
LADVRDEARL KRLFSGIDIV FHTAAFKHVE LCEVSPFEAV QTNIHGVQNV VWAAVENRVR
TVVFTSSDKA VNPTNVMGTS KLMGERLMTA ANSNLRSGKT VFAATRFGNV LGSRGSVIPI
FREQIRKGGP VTLTDPDMTR FIMSIRQAVQ LVIDSADIAR GGEVFVTKMP VIRIEDLARV
MIDDLAPRYG HDPAAVTTEV IGTKAGEKLY EELMTDEETR RSLELARYFV VRPAFLSLYR
EIDYTYADMI SDRVDRPYHS ANETPLTQAE LRAFLYENNL IEGEAAEPFQ PAKRF
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