Gene Dole_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1250 
Symbol 
ID5694085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1494217 
End bp1495059 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content49% 
IMG OID641263844 
Producthypothetical protein 
Protein accessionYP_001529133 
Protein GI158521263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00375615 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGA GAAGAATCGT ATCCCTCACG GCTTTTTTGT CGTTCCTTGT TACGTTCCTG 
ACCAGCATCA TTTTGTATAT CGTTCCTGAA GGCCGTGTCG CATACTGGGC GGACTGGCGG
CTCTGGGGGC TCTCCAAAGA AGAGTGGGGC GCCATTCATA TCAATGTCGG TTTTCTGTTT
CTGCTGTCGC TGCTGCTGCA CATTTATTAC AACTGGAAGC CGATTGTCAC TTACCTCAAA
AACAAGGCCA AGCAGGTAAG CATATTTACA AAAGAGTTTA ATGCCGCCCT AGTGTTAACC
GCGTTGTTTG TTTTCGGTAC ATACTTTGGC GTCCCTCCCT TTTCCACCAT CATTCATTTC
GGTAAAAGTT TCAAAGACGC TGCCGCGGAA AAATACGGCG AACCGCCATA TGGCCATGCC
GAGCTCTCAT CGGTTAAAAC GTTTGCCAAA CAGATGAATA TTGACCTGGA AAAAGGAATG
CTTCTGCTAA GGCAGGCGGG TTACAGGGTT GACAGCGACG CCTGGACACT CAAGGAAATA
GCCGAACAGA ATGGTGTATC GCCTCAGCAG GTATTCCTGG CAATGTCCGA CGCCATACAA
ACCGCTGAAC AATCCGTTGG GCTTCCTGAA AAGCCCGCGC CGGGCGCCGG GAACCTGACA
CTGGCGGATT TCTGCACGCA ATACCACCTC AACGTAAAAA TGATCATGAG ATCGCTGAAA
GATGCGGGCA TTACATCAGA AGCGGATATG ACAATAAAGG AAATCGGCGA AGCCAATCAA
ACCGGTGCGA TTGAGGTTTA TGAACAGATA AGATCATTCG CCGACAGGAG CAACGAGCAA
TGA
 
Protein sequence
MSMRRIVSLT AFLSFLVTFL TSIILYIVPE GRVAYWADWR LWGLSKEEWG AIHINVGFLF 
LLSLLLHIYY NWKPIVTYLK NKAKQVSIFT KEFNAALVLT ALFVFGTYFG VPPFSTIIHF
GKSFKDAAAE KYGEPPYGHA ELSSVKTFAK QMNIDLEKGM LLLRQAGYRV DSDAWTLKEI
AEQNGVSPQQ VFLAMSDAIQ TAEQSVGLPE KPAPGAGNLT LADFCTQYHL NVKMIMRSLK
DAGITSEADM TIKEIGEANQ TGAIEVYEQI RSFADRSNEQ