Gene Dole_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1120 
Symbol 
ID5693954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp1330447 
End bp1331025 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content62% 
IMG OID641263714 
Producthypothetical protein 
Protein accessionYP_001529004 
Protein GI158521134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.036635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTCA AAAGAAAAAA ACAGGCCGGC CCGGACCGGC CCGTCGAAAA AGCCGAAGAG 
AGCCTGACAA AAGGGGTGAT GCTGGCCTAC TGGATTCTGC TGCTGCACCT GGGGCTGATC 
GCAATTGCCG GCCTGGTGGT GCTTATTTTC AGGGGCGTTG CGTATTATTT TCTGTGGCTC 
GTGTTCGGCG GCGCCGCCAT TGTGGCGGGC AGTGGATACT ACATATTAAA AAAGATGAAG 
CAGGAACGCC ATACCATTCA GCAGATCCTG CGAATGCCGG AGTTCCGGGG CCGGCCGGTG 
GAGATCAGCC TGCTGGGCGG GGCCGCCTCC CTGCGTATGG GCGGCGGGTC GCCGGCCCCC 
ATGGATGTCA ACCCGGCAGG TGGTTCTGCC ACGCCGCTGC TGGAAGACCC GGCCCGCACC 
CGTATTCGCG ACCTGGGCGA GCTGGGCCGG CTCTACCGGG ACGGCATGAT CACCCGGCAG 
GAGTATGAGG CCCTGAAGAG CGGAATACTG GCATCGGTCC GGCCGGAAGC GTTGAATGGC 
GACCCATCGG GCACGGTGGA TATCGGCTCT GCGGAATAA
 
Protein sequence
MFFKRKKQAG PDRPVEKAEE SLTKGVMLAY WILLLHLGLI AIAGLVVLIF RGVAYYFLWL 
VFGGAAIVAG SGYYILKKMK QERHTIQQIL RMPEFRGRPV EISLLGGAAS LRMGGGSPAP 
MDVNPAGGSA TPLLEDPART RIRDLGELGR LYRDGMITRQ EYEALKSGIL ASVRPEALNG 
DPSGTVDIGS AE