Gene Dole_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1106 
Symbol 
ID5693940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1317639 
End bp1318892 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content57% 
IMG OID641263700 
Producttrimethylamine:corrinoid methyltransferase-like protein 
Protein accessionYP_001528990 
Protein GI158521120 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5598] Trimethylamine:corrinoid methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.491742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTGCCG GCCGGTACCG GCACAGTAAG GAGGCCCGAT TGAACAGCGA GCAGGTCAAC 
CATTCTGAAC GTGTGCTGGG AAAACCAACC GTGGAGATGC TCAAACAGGT CCACGAGGAT
GCCTGCTGGA TTCTGGAAAA CCTGGGTGTG GGATGCCGGC AGCCCCAAAT GGTGGAGGCG
TTCAAAGCCC TTGAGGCTGA AGGCCTGGTC CTGATTCATG AGAACCGGAT TTACCTGATG
CGCGACCTGG TGGACCGGTG CCTGGGCAGT ACGCCGGGTG TGGCCGATTT TTTTGTGCCG
AGAAACAGCT TTTTTGTCGG CGGCACGGCG CCCTATATTT ATGATGATGA AAAAGGGCTG
GGCGGTATCA TGCCCACCGA AGACCACGTG GCCCGCATTG CTCAAATCGC GGAGAAAAGT
CGTGTGGTGG CCGGCATGGG CCGGGGCGTG AAGCTTGCCG ACGAGGTGGT CCAGATGAAC
CTGATGGATG CCCACTGCGC CAAGCCGCTC TATTTTGCCG TGACATCGGA CGCCGCCCTG
GAACGGGCCG TGGCCCTTCA CAAAAAGCGG GGAAACGTGA TGGTGGTCTT CTGCCTGACC
CGCCCCCCCC TGGAAGTAAA TGAAAATTTT TCCGAGCATT TTGTAAAGGT GGTTCAGGCC
GGTCTGCCGG TCTTTATTTC CGCCATGCCC ATGGCCGGCA TCAGCGCGCC TTTCTGTTAC
AACGGGGTCC TGGCCATGAC CCATGCCGAA GTGCTCTTCG GTATCTGTGT GTCCCAGCTG
CTTCGGCCCG GTGCCGTGTG CATTCATGCC GGGTTTCCCA CCATTGCCGA CCCGCGCATC
GAGTACAACC CCAACTACGG GCTGGTCTCC CATAACCTGC TCAACATTCT GATGACCCAC
CTGTGCCTGA TGCTCGATCT GCCGGCGTTT CAAAGCGCCT GCACCACTCA CGAGGAGCAC
CTGACCCGGC GGGCCTATGA CGATGCCAAA GCCGGGCAGG CCATGTGTTT GAAGTACGGG
TTTCACATGA TGCGTCACAC CTTTTCATTT CTGCGGTACC TGATCGATTT TTCCATCGAA
AAGCTGGAAC GCTCAATTGA GATTCTGGAA AATACCACCC CGGACGATGC ACCCGCGGTG
GAGATGCCGG TTTACGATCC CCGGGGCATG GAATCAATCA TGCACACCGG GGTGGGCATG
TATATGGAGG ATCCGCTGAC CACAGCCAAC TTCGGCAAGG TGTTTGTCGA TTAA
 
Protein sequence
MFAGRYRHSK EARLNSEQVN HSERVLGKPT VEMLKQVHED ACWILENLGV GCRQPQMVEA 
FKALEAEGLV LIHENRIYLM RDLVDRCLGS TPGVADFFVP RNSFFVGGTA PYIYDDEKGL
GGIMPTEDHV ARIAQIAEKS RVVAGMGRGV KLADEVVQMN LMDAHCAKPL YFAVTSDAAL
ERAVALHKKR GNVMVVFCLT RPPLEVNENF SEHFVKVVQA GLPVFISAMP MAGISAPFCY
NGVLAMTHAE VLFGICVSQL LRPGAVCIHA GFPTIADPRI EYNPNYGLVS HNLLNILMTH
LCLMLDLPAF QSACTTHEEH LTRRAYDDAK AGQAMCLKYG FHMMRHTFSF LRYLIDFSIE
KLERSIEILE NTTPDDAPAV EMPVYDPRGM ESIMHTGVGM YMEDPLTTAN FGKVFVD