| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1106 |
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| Symbol | |
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| ID | 5693940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1317639 |
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| End bp | 1318892 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641263700 |
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| Product | trimethylamine:corrinoid methyltransferase-like protein |
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| Protein accession | YP_001528990 |
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| Protein GI | 158521120 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG5598] Trimethylamine:corrinoid methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.491742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTGCCG GCCGGTACCG GCACAGTAAG GAGGCCCGAT TGAACAGCGA GCAGGTCAAC
CATTCTGAAC GTGTGCTGGG AAAACCAACC GTGGAGATGC TCAAACAGGT CCACGAGGAT
GCCTGCTGGA TTCTGGAAAA CCTGGGTGTG GGATGCCGGC AGCCCCAAAT GGTGGAGGCG
TTCAAAGCCC TTGAGGCTGA AGGCCTGGTC CTGATTCATG AGAACCGGAT TTACCTGATG
CGCGACCTGG TGGACCGGTG CCTGGGCAGT ACGCCGGGTG TGGCCGATTT TTTTGTGCCG
AGAAACAGCT TTTTTGTCGG CGGCACGGCG CCCTATATTT ATGATGATGA AAAAGGGCTG
GGCGGTATCA TGCCCACCGA AGACCACGTG GCCCGCATTG CTCAAATCGC GGAGAAAAGT
CGTGTGGTGG CCGGCATGGG CCGGGGCGTG AAGCTTGCCG ACGAGGTGGT CCAGATGAAC
CTGATGGATG CCCACTGCGC CAAGCCGCTC TATTTTGCCG TGACATCGGA CGCCGCCCTG
GAACGGGCCG TGGCCCTTCA CAAAAAGCGG GGAAACGTGA TGGTGGTCTT CTGCCTGACC
CGCCCCCCCC TGGAAGTAAA TGAAAATTTT TCCGAGCATT TTGTAAAGGT GGTTCAGGCC
GGTCTGCCGG TCTTTATTTC CGCCATGCCC ATGGCCGGCA TCAGCGCGCC TTTCTGTTAC
AACGGGGTCC TGGCCATGAC CCATGCCGAA GTGCTCTTCG GTATCTGTGT GTCCCAGCTG
CTTCGGCCCG GTGCCGTGTG CATTCATGCC GGGTTTCCCA CCATTGCCGA CCCGCGCATC
GAGTACAACC CCAACTACGG GCTGGTCTCC CATAACCTGC TCAACATTCT GATGACCCAC
CTGTGCCTGA TGCTCGATCT GCCGGCGTTT CAAAGCGCCT GCACCACTCA CGAGGAGCAC
CTGACCCGGC GGGCCTATGA CGATGCCAAA GCCGGGCAGG CCATGTGTTT GAAGTACGGG
TTTCACATGA TGCGTCACAC CTTTTCATTT CTGCGGTACC TGATCGATTT TTCCATCGAA
AAGCTGGAAC GCTCAATTGA GATTCTGGAA AATACCACCC CGGACGATGC ACCCGCGGTG
GAGATGCCGG TTTACGATCC CCGGGGCATG GAATCAATCA TGCACACCGG GGTGGGCATG
TATATGGAGG ATCCGCTGAC CACAGCCAAC TTCGGCAAGG TGTTTGTCGA TTAA
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| Protein sequence | MFAGRYRHSK EARLNSEQVN HSERVLGKPT VEMLKQVHED ACWILENLGV GCRQPQMVEA
FKALEAEGLV LIHENRIYLM RDLVDRCLGS TPGVADFFVP RNSFFVGGTA PYIYDDEKGL
GGIMPTEDHV ARIAQIAEKS RVVAGMGRGV KLADEVVQMN LMDAHCAKPL YFAVTSDAAL
ERAVALHKKR GNVMVVFCLT RPPLEVNENF SEHFVKVVQA GLPVFISAMP MAGISAPFCY
NGVLAMTHAE VLFGICVSQL LRPGAVCIHA GFPTIADPRI EYNPNYGLVS HNLLNILMTH
LCLMLDLPAF QSACTTHEEH LTRRAYDDAK AGQAMCLKYG FHMMRHTFSF LRYLIDFSIE
KLERSIEILE NTTPDDAPAV EMPVYDPRGM ESIMHTGVGM YMEDPLTTAN FGKVFVD
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