Gene Dole_1095 details

Gene Information

• Locus tag: Dole_1095
• ID: 5693929
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1300954
• End bp: 1301718
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641263689
• Product: NERD domain-containing protein
• Protein accession: YP_001528979
• Protein GI: 158521109

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00991797
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGTCTC CGCTGAAGGA CAAACCCCTG CGCAACCCCG GCGAATCGCT GGATATTGAG 
CTGAAAGACA CACTGGTTGC AGATCTGCTT CTGTATTATG TGTTTGCCTG TTTTATGGTG 
CTTTTAGCTA TTCTGGAATG GTGGCGATGG TTTAAAAGTT CTTCACCTAC CCCAGTACCG 
TACACGGTGG TGGCGACAAC GGTCATACTT ATTGCGATGT TTCAGCATGT TCGGCTCAGG 
GCAAAAGCAA AGAACCTCAG ACTTGGCAGA GACAGCGAAA AAGCGGTGGG CCAGTATCTT 
GAGCTTTTGC GAGAAACCGG AGCCAAGGTC TTTCATGATA TTCCGGGGAA GGGTTTTAAC 
CTCGACCATG TGGTGATTCA TGAAACCGGA ATATACGTTG TTGAAACAAA GGCCCTGTCC 
AAGCCGGATC GGGGGGAAAC AAGGCTTGTG TACAACGGCG AAAACGTATT GAAAAACGGC 
CTTGCCCCGG ACCGCAACCC CATTGACCAG GTCCGGGCCG CCAGAAACTG GCTTGTCAAT 
CTGTTAAAAG AGTCTACCGG CAAAAAAATT TCCGCCCGCC CGGTGGTGGT CTATCCGGGC 
TGGTACATAC AACCAACGGC TGAGGCAAAA TCAAGCGACG TGTGGGTACT CAACCCCAAG 
GCCCTGCCGG CATTCATTGC CCACAGCAAG CCGCAGCTCA GCGCGGAAGA TGTGAACCTT 
TGCGCGTATC ATCTGGGACG GTATGTTCGT ACGGAGGGTG TATGA 

 

Protein sequence

MKSPLKDKPL RNPGESLDIE LKDTLVADLL LYYVFACFMV LLAILEWWRW FKSSSPTPVP 
YTVVATTVIL IAMFQHVRLR AKAKNLRLGR DSEKAVGQYL ELLRETGAKV FHDIPGKGFN 
LDHVVIHETG IYVVETKALS KPDRGETRLV YNGENVLKNG LAPDRNPIDQ VRAARNWLVN 
LLKESTGKKI SARPVVVYPG WYIQPTAEAK SSDVWVLNPK ALPAFIAHSK PQLSAEDVNL 
CAYHLGRYVR TEGV