| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1088 |
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| Symbol | |
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| ID | 5693922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1288694 |
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| End bp | 1289710 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641263682 |
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| Product | hypothetical protein |
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| Protein accession | YP_001528972 |
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| Protein GI | 158521102 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCC GACACGCGAT AAGCGGTTTT ACGCTCCTGG AAGTGATGGT CGTTATCGCC
ATCATCGGCA CACTGGCGTC CATCGCCTTT CCGCTCTACA TTTCTAATAT TGAACGGGCA
CGCTCTGCGG CGTGCCTGGT GGAACGGAAG CACATCAACA AAAGAATCAT CATTTACTGC
AACAACAGCC CCGAAACCCC ACCGGAAAGC ATGGCTCAAC TGGTGGCGGA AGGGTACTTT
AAATCCGCTC CACACTGCCC ATATGGGGGA ACATACGTGC TTGTGCCGGC CGGTAATAAC
CGGCCTTACC CGGAGGTGGC CTGCTCGCTT CATTACTTTC CGCAACCAAC AGGGGATGCC
GGCGATGGGG GCAGTGACAA TGACGATGAT CCGGCGCCCC CTCCCGCGCC TTATCCGGTA
AACATACCGC TGACCGGATT CGATGATTTT ATCAAGGTCG GTTCCGGGTG GGACCTGACG
AAAACCGGTA TTCGCGTCCA GGGAGGAAGC GGTGGGATCG GCGGCAGCAA CCGGCTTTTT
GTTCCCAATC CGCTTGGAAC CGGCAGTTAC GCCATCACGG TGAATGCCCG CCTGGGTGAA
GGAGACGACG GCGGTTACGG CATTTTTTTC GACGCTGTGG TAGACAAGTA TGGCCGGATT
TCGTCCGGCT ACATACTACA ATTTGACCGC GGCTTCGGCA ACGGCCAACT GGTCATCAGA
CAATGGAGCA ACGACCGCGA GTCTTCCAGC GCCCCTTCCA GAAACCGGTT CGATGATCCG
TCTGTTATCC CCCACAAGGT CAAGGATCCG GACTGGTGGA CAACGACAAA AGAGATCAAG
CTCGATGTGA TCGACCTGGG TAACGGCCAT AAGCAGCTTT CCGTTTATCT TGACGGCGTA
CCGACCTTCA ATAATTGGGA ATTTGAGGGG AATTCCGGGC AGGATACGTA CACGGGTTTC
AGGGGATGGC ACGGGCCCAC CGCCGAATTT ACAGATCTCT CAATCAACAA CCCTTGA
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| Protein sequence | MKIRHAISGF TLLEVMVVIA IIGTLASIAF PLYISNIERA RSAACLVERK HINKRIIIYC
NNSPETPPES MAQLVAEGYF KSAPHCPYGG TYVLVPAGNN RPYPEVACSL HYFPQPTGDA
GDGGSDNDDD PAPPPAPYPV NIPLTGFDDF IKVGSGWDLT KTGIRVQGGS GGIGGSNRLF
VPNPLGTGSY AITVNARLGE GDDGGYGIFF DAVVDKYGRI SSGYILQFDR GFGNGQLVIR
QWSNDRESSS APSRNRFDDP SVIPHKVKDP DWWTTTKEIK LDVIDLGNGH KQLSVYLDGV
PTFNNWEFEG NSGQDTYTGF RGWHGPTAEF TDLSINNP
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