Gene Dole_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1077 
Symbol 
ID5693912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1275814 
End bp1276119 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content41% 
IMG OID641263673 
Producthypothetical protein 
Protein accessionYP_001528963 
Protein GI158521093 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGT TAAAGGGGTT TCAACGAAAA TATTTAAGAG AGCTTGCTCA CAGCCTTAAG 
CCGGTGGTGT CAATTGGTCA AAAAGGAATA ACAGATGCAG TTATTCGAAC AATCGATGAA
GCCCTTGATA CCCATGAACT TATAAAATTA AAGTTGCTTG CTTTTAAAGA AAAAGATCAA
AAAAAAGAGA TCATCGAACG TATTGAAGTC GAGAATAAAT GTGAGGTAGC CGGAACCATC
GGCCACACGG CGATTCTCTT CAGGCAGCAC CAGGATCCTG AAAAACGAAA GATCACTCTC
CCCTGA
 
Protein sequence
MTQLKGFQRK YLRELAHSLK PVVSIGQKGI TDAVIRTIDE ALDTHELIKL KLLAFKEKDQ 
KKEIIERIEV ENKCEVAGTI GHTAILFRQH QDPEKRKITL P