Gene Dole_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1075 
Symbol 
ID5693910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1272716 
End bp1273942 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content43% 
IMG OID641263671 
Producthypothetical protein 
Protein accessionYP_001528961 
Protein GI158521091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT CAGCTTTTAA TCTCACATTG CGCGTTATTG TGGTTATCGT GATGCTTTGT 
GCCGCGTCTC CGGTTTTGGG AGAATATGAT TGGGATATAA AAACGCCAAT CCCCTCTTAC
GACCCTCTGT GGGATACCTT CAGCGTCATG TGGGAAAACC GCTGGGAAGG CGAAAACACT
GACGAAATGA TCTCCCTTCT TGAAAAACTT GAAACAAAAT ACAGCGACAG GATTGAACCC
TGCCTTTTTC TTGGCAGGTG TTACTACATA AAGGGCCTTC ACCAATTAAG TGAACGGCAC
AATTTCAATA AAATCGCTGA AACATATGCG GTAAAAGCAT ATAAAATAGA CAATGATAAT
TTCCATGCCT TTTTCCTGCT TTTAAATGCA CTAAGCAGCC GTGAGGACTA CAATTATATC
ATGTCCAATT ATGGTGAATG GATTCATGCG ATGAGTCCTC TCAAAGAACT AGCCGCTCTG
CCTGATCTGC CTCCATCAGA AGCGTGGCAT GAGGCCAGGA AAAATTGGGA ACAGAAGCAC
GATATTGCTC ATCTTCGAAT AGCCATCAAA CAGATTGAAG CCATTGCAAA GAAGAACCCC
AACGACGGCC TTTCACAACT ATGGGCATGC CAGGCATACT ACAAGCTGGG TGATTATTAT
ATGCAGCAGG GCGAGCATAA AAAAATGGGC GTTCCAAACT ACCAGATCGC CATGGAATAT
GCAGAGAAGG CCCTTAAATT AATGCCCTAT AGTGTAGAGG CGCATTACTG GTACCAGCTT
TCCCTTTCCA GAAAGATACA GGTCGCGAAC ATTTTTACTA AAGCCTTGTA TTTAAACACA
CTAATGGATC ATTTGATTTT TTGCATTCAG GAAAATGCCT TGTATGAATT TGGTGGCCCG
GTAGATTGCG TTGCAACCAT GATTGTGGAA GGTGGATGGG TATGCGAAAA AGCCATGGAC
ATGGCTGGAT TCAACATGAA TATAATTATC AACATGCTTC AAACCAACCA AATCCTGTTT
CCGGATAACA CTTACAATGC CTATATTACC GCGGTGCTCA TGGATAACGA GAACCGAGAA
CAGGAAGCCC TTGCAGTATT GGAAGAATTG TTAAAGAAAG GGCCGCCGGC GCCTGATCAT
CCAAACAGAA ACAATGCACT TTATATACAT GCATACAACT TGTCCAATGC ATTGCATGAA
AAACTGGTTT CAGAAATTAA ATCCTGA
 
Protein sequence
MKNSAFNLTL RVIVVIVMLC AASPVLGEYD WDIKTPIPSY DPLWDTFSVM WENRWEGENT 
DEMISLLEKL ETKYSDRIEP CLFLGRCYYI KGLHQLSERH NFNKIAETYA VKAYKIDNDN
FHAFFLLLNA LSSREDYNYI MSNYGEWIHA MSPLKELAAL PDLPPSEAWH EARKNWEQKH
DIAHLRIAIK QIEAIAKKNP NDGLSQLWAC QAYYKLGDYY MQQGEHKKMG VPNYQIAMEY
AEKALKLMPY SVEAHYWYQL SLSRKIQVAN IFTKALYLNT LMDHLIFCIQ ENALYEFGGP
VDCVATMIVE GGWVCEKAMD MAGFNMNIII NMLQTNQILF PDNTYNAYIT AVLMDNENRE
QEALAVLEEL LKKGPPAPDH PNRNNALYIH AYNLSNALHE KLVSEIKS