| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1056 |
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| Symbol | |
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| ID | 5693891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1249047 |
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| End bp | 1250876 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641263653 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_001528943 |
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| Protein GI | 158521073 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.923429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGGAT ATCGGGATAT TCAGGCGGCA ATGCCGATGC TCGGTGAACT GGATCGCCGG
TTCGGCGAAC TCCTGACGGC CCTTGATCCC GGCGGCGGGA AAGAGCTGTT TCTGGCCGCT
GCCCTTACCC TCTGGCACAC GCGCAGGGGG CATGTCTGTT TTGATCTTAA TCGGGCAGAC
GCCTTTCTGA CGGACGGCCT TGACGGCGTT TCCCTTCCCG ACGGCCGCCA GTGGGCTGAC
ATCCTGTCCC GAAGCGCGGT GGTGGCCCGG CCCGGCGGCG ACCCGGCCCC TCTTGTTCTG
GACGGAGAAG GACGGCTGTA CCTGCACCGG TACTGGGCCT ATCAGGAGCA ACTGGCCGAT
TTTATCCGTT CCCGGGCCGG TATTATTCGA AAGGTGGACG CACACCGGTT GAAGGAGGGC
CTTACCCGGT GGTTTCCCGG CCAGGGGCCC GGCAACGGCC CGGACATGCA GCGTGTGGCG
GCCGTATCGG CACTGACCCA TGATTTTTCT GTGATCACCG GCGGCCCGGG TACGGGAAAG
ACCCTTACCG CGGCACGAAT TCTGGCCCTG CTGGCAGAAC AGGCCGAGAA CCGGCCCCTG
GCAGCCGTTT TGACCGCGCC CACGGGAAAG GCCGCGGCCC GCCTGGGTGA GGCGATGTCT
ACGCTGCGCG GAGCCGTCCC GGGTCCGGCA TCTGAAAACC GGCTGGAGGT CCGGGCCTGT
ACCATTCATC GCCTGCTGGG AGCCCTTCCG GGAACAACGG TTTTCCGGCA TCATCGTCAC
AACCCCATTG CCGCCGACGT GGTGGTGGTG GACGAAGCCT CCATGGCGGA TGTCGCCCTC
ATGGCAAAGA TGGTGGATGC CTTGCCCGAT CACTGCCGGC TGATACTGGT GGGGGACAAA
GACCAGCTTG CCTCGGTGGC GGCAGGGTCG GTGTTTGCCG ATATCTGCGG CGCGGCGGGG
AGAAACCGGT TTTCCGCTGA TTTTCTTCAG GCCCTTGAAG CAGCCGGGGT GCTGACCGGA
GGGATGAAGG CCTTTCCTGC GGGCACCGCC CGCCTGGCCG GCAACGTGGT GCACCTTGAA
ACGGTTTATC GCTTTGAACA CCGGGGCGGC ATGGAAATGG TGAGCCGGCT GGTGCGGGAA
GGGGCGGCCG GTGAAATTGT GGAAGCCCTG GCGACCCCCG GCCATCAGGA TGTCACATGG
ACAGCTCCGG ACCAGGAAGA GTGGCGGGAA CGACTGGCAC GGACCGTGAC GGCCTGGGTA
AAAGACTGCC TGTCGGTGTC GGCGAATCCG GAAATGGTGC TTGACCGGCT GGGGTCGTTT
CGCGTACTGT GCGCTTTGCG CGAAGGGCCT GCCGGCGCCC TGGCCCTTAA CCGGTCTGTC
GAACACTCTC TTCAACGGGC AGGGGTTGTG GCTTCAGGCC GGCTGTGGTA TGCGGGTCGT
CCGGTAATGG TGCTGAAAAA CGACTATTCC CTGGAGTTGT TTAACGGCGA TGTCGGTATC
ACTTTGTGGG ACGGCGATCG GCTGAGCGTC TTTTTCAAAG ACGACCGGGG CGGGGTGAGA
AAATTTCATC CCGGCCGCAT TCCCGAACAT GAAACCGTTT ATGCCATGAC GGTTCACAAG
GGCCAGGGCT CGGAGTTTGA AAAGGTGGTG TTTGTGATGC CGGACAGGGA CGGCCCGGTG
TTGACCCGTG AGCTTGTGTA CACGGCCCTG ACCCGTGCCA GATCCCATAT TGAAATTATC
GGGAAAAAGG ATATTATTGA GGCGGCCGTG TCCCGATCGG TTTCAAGACG GTCCGGCCTT
GTGGAGGCAA TCAATAACGA CCAGGACTAA
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| Protein sequence | MDGYRDIQAA MPMLGELDRR FGELLTALDP GGGKELFLAA ALTLWHTRRG HVCFDLNRAD
AFLTDGLDGV SLPDGRQWAD ILSRSAVVAR PGGDPAPLVL DGEGRLYLHR YWAYQEQLAD
FIRSRAGIIR KVDAHRLKEG LTRWFPGQGP GNGPDMQRVA AVSALTHDFS VITGGPGTGK
TLTAARILAL LAEQAENRPL AAVLTAPTGK AAARLGEAMS TLRGAVPGPA SENRLEVRAC
TIHRLLGALP GTTVFRHHRH NPIAADVVVV DEASMADVAL MAKMVDALPD HCRLILVGDK
DQLASVAAGS VFADICGAAG RNRFSADFLQ ALEAAGVLTG GMKAFPAGTA RLAGNVVHLE
TVYRFEHRGG MEMVSRLVRE GAAGEIVEAL ATPGHQDVTW TAPDQEEWRE RLARTVTAWV
KDCLSVSANP EMVLDRLGSF RVLCALREGP AGALALNRSV EHSLQRAGVV ASGRLWYAGR
PVMVLKNDYS LELFNGDVGI TLWDGDRLSV FFKDDRGGVR KFHPGRIPEH ETVYAMTVHK
GQGSEFEKVV FVMPDRDGPV LTRELVYTAL TRARSHIEII GKKDIIEAAV SRSVSRRSGL
VEAINNDQD
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