| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0963 |
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| Symbol | |
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| ID | 5693798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1124163 |
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| End bp | 1125095 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641263560 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001528850 |
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| Protein GI | 158520980 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATAA GAATAGGTTC GAGAAAAAGC AGTCTGGCGA TGTGGCAAAC CTGTTATGTT
GAAGACAAGT TGAAACAGTC GGGTATAACC ACTTCCATTC TGCCCATTGA TACCCGGGGA
GACCAGGTTC TGAATGTGGC CATCGCGAAA ATCGGCTCCA AGGGCGTGTT CACCGAGGAG
CTGGAGGCAA AGCTGGCCGA CGGCGATATC GACATTGCCG TGCACAGCGC CAAGGACATG
CCTTCCGTGC TGCCGGACGG TTTTGAACTG ATCGCCTTTA CCGACCGGGA AGAGCCCGCG
GATGTTCTGG TGAGTCACAA AAAAGATCTG GACATCAGTG ATTCATCACG ACCGGTCACC
ATCGGCACCT CATCGGTGCG GCGCCAGGCC CTGCTGGGAC GGTTTTATCC CCATGTCCGG
ACCGTGGATA TTCGGGGCAA CGTTCAGACC CGTGTTCTAA AAATGAAAGA AGGCCTCTGC
GACGCCATTC TCATGGCCTA TGCCGGTATC CATCGAATGG GCATGGACGA CCTGATCGTC
CACACGTTTT CGCCCGACAC ATTTATTCCA CCGGTGGGAC AGGGGTGCAT TGCGGTGGAG
GCATCCAGCC GCCTGGCTGC TGAAAAAAAA GAGGCCATTC GGGCCTGTAT CAACCACCCG
GCCAGTGAAA CCTGCCTGCT GGCTGAAAGG GCCTTTCTGA AACGGCTGGA AGGGGGCTGT
TCGATTCCCG CCTTTGCCCT GGCCCGTTTG AATGGCGACC GCCTCACGCT TTCCGGGGGA
CTGATGAGCC TGGACGGCAA AAAATTTATA TTCAACACCC GCGCCGGCGC CGGCAGCCAG
GCAACCGCCA TCGGCACGGA TCTGGGAAAC CATGTTCTGG AAAACGGCGG CGCCGCCCTG
CTGGCAGAAA TCAGAAAACA ACAGACCACA TAA
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| Protein sequence | MEIRIGSRKS SLAMWQTCYV EDKLKQSGIT TSILPIDTRG DQVLNVAIAK IGSKGVFTEE
LEAKLADGDI DIAVHSAKDM PSVLPDGFEL IAFTDREEPA DVLVSHKKDL DISDSSRPVT
IGTSSVRRQA LLGRFYPHVR TVDIRGNVQT RVLKMKEGLC DAILMAYAGI HRMGMDDLIV
HTFSPDTFIP PVGQGCIAVE ASSRLAAEKK EAIRACINHP ASETCLLAER AFLKRLEGGC
SIPAFALARL NGDRLTLSGG LMSLDGKKFI FNTRAGAGSQ ATAIGTDLGN HVLENGGAAL
LAEIRKQQTT
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