| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0931 |
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| Symbol | |
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| ID | 5693766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1086765 |
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| End bp | 1088024 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263528 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
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| Protein accession | YP_001528818 |
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| Protein GI | 158520948 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | [TIGR02260] benzoyl-CoA reductase, bcr type, subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATAA ATGAAAAAAC CAGGGCCGGG AAGCATCTGA CCGAACTGCT GGTAAAAACC
TATACAGACA TCCACACACG GGCTGCTGCC GGCGCTTTTG TGGTGTGGGG GGCCATCATT
GTTCCGGCCG AGATTTTTGC GGGATTTGAC AACGTGGTGT TCTGCGCGCC GGAAAGCCAC
GCGGCCGTGT GCGCGGCCAA GGGCGTGGGC GCGGCCCAGT GCCTGAAGGC CGAATCCCTG
GGATATTCCA TGGACCTCTG TTCTTACGCC CGCATTGACA TCGGCTGTTT TTCCGACGGC
TGCAAGGAAT CCCCCACCAT GGGCCTGCCC CGGCCCCACC TGCTGATTTC AAACACCAAC
AACTGTTCGC TGCTGGTCAA GTGGTTTGAC GTGCACCGGC GCGACATGGA CATTCCCCAT
TTCATCCTGG ACGTGCCGTT CTGCTACGGG CCCCAGCAGG AAAAGGACCG GGACTATATT
CTGACCCAGT TCGGCGACCT GATCCAGACA GTGGAGCGGC TCTCCGGCCA GACCTTTGAC
CGGGACCGGT TTTACGAGGC GGCGGCGCAC ACGGCCTCGG CCTCCATGGA CTGGAAACGG
TTTATGGCCT GCGCCGAACA CCGGCCCTCG GGTATTACGG TGTTTGATTC CTTTGTGCAG
ATGGCGCCCT TTCTCATTGC CCGGGGAACC CCGGAACTGG CGGCCCATTA TAAGATCCTG
GCCGACGAGA CCGAGGCCAA CGTGAAAGCC GGCATTTTCC CGGTGCCGGA CGAAAAATAC
CGGCTTCTGT GGGACAACAT CGCGCCCTGG CACCAGCTTC GAAAAATGTC CACGCGGCTG
GCCGGCATGG GGGCCAACAT CGTGGCCGCC CCCTACACTT CCTGCATCGG GGCCGTTGAG
GGAAGCTACG ACCTGCTTTC TTTTGACGAA AATGATGATC CGTTGTGGTA TCTGGCACGG
GTTCAGAACC ATTCGGTCTG CCCCATGGGT ATGGACCTGC GGCTTTCGTC CATGGGCCCG
GTGATCGAGA AGCTGGGCAT CGACGGCGTG GTGTTTGCCA GCAACCGCAG CTGCAAGGTG
TTTTCCGTCA TGCAGATGGA TGAGCAGCGC CGCGTCAGGG AACAATACGA TATTCCGTGT
GTGATGATCG ACGTGGACCA CGCGGATGTG CGCAAGTTCA GCCAGGAAAA TGTTTATGTG
CGGCTGGAGG CCCTGCTGGA GAGTATCGAG GCCAAACGGG CCTCGGCGGT GTCTGGTTAA
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| Protein sequence | MEINEKTRAG KHLTELLVKT YTDIHTRAAA GAFVVWGAII VPAEIFAGFD NVVFCAPESH
AAVCAAKGVG AAQCLKAESL GYSMDLCSYA RIDIGCFSDG CKESPTMGLP RPHLLISNTN
NCSLLVKWFD VHRRDMDIPH FILDVPFCYG PQQEKDRDYI LTQFGDLIQT VERLSGQTFD
RDRFYEAAAH TASASMDWKR FMACAEHRPS GITVFDSFVQ MAPFLIARGT PELAAHYKIL
ADETEANVKA GIFPVPDEKY RLLWDNIAPW HQLRKMSTRL AGMGANIVAA PYTSCIGAVE
GSYDLLSFDE NDDPLWYLAR VQNHSVCPMG MDLRLSSMGP VIEKLGIDGV VFASNRSCKV
FSVMQMDEQR RVREQYDIPC VMIDVDHADV RKFSQENVYV RLEALLESIE AKRASAVSG
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