| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0883 |
|---|
| Symbol | |
|---|
| ID | 5693718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1034482 |
|---|
| End bp | 1034985 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641263480 |
|---|
| Product | type IV pilus assembly PilZ |
|---|
| Protein accession | YP_001528770 |
|---|
| Protein GI | 158520900 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCAA ACCCGCTTTT AAACACGACG GAACTGCCCA TGACAACCAG CGACAAACCG
AAGGCGCGTC CCGCGGCCAC GCAAGGCGGC AAAACAGCGG GGCCAAAACA GAAGGCCCGG
CCCGGGGGAA AAATTAAAAA GCAGCAACCG GGGACATCTG CAAAGCCCCG CAAAGCCCCT
TCAGCGGAAA AACCGGCACC GGCGGCGGCA TCCAAACCCC AGGCCCCCGA AGCGACGGAC
AAACGGCAAC ACCCCAGAAA GCCCTTGCGG CTGAACGTCA GCGTGACCAG GGGAGAAGTC
TCGGGCACCA GCATGGCCAG AGACATCAGC CTGGGCGGCC TGTTTCTGGA AACCATTGAG
GAGATGGCCC CGGGCCAGGT GCTTCAACTG TCGATTCCCT TTACCAACCA GGACCGCCAG
ATCAAGGTCA AGGGCAAGGT GGTGCGAATG ACGGAAGACG GTGTGGGTGT TGAGTTCGAT
ATCTATTCCA TTGATATCGA ATAG
|
|---|
| Protein sequence | MAPNPLLNTT ELPMTTSDKP KARPAATQGG KTAGPKQKAR PGGKIKKQQP GTSAKPRKAP
SAEKPAPAAA SKPQAPEATD KRQHPRKPLR LNVSVTRGEV SGTSMARDIS LGGLFLETIE
EMAPGQVLQL SIPFTNQDRQ IKVKGKVVRM TEDGVGVEFD IYSIDIE
|
|---|
| |