Gene Dole_0879 details

Gene Information

• Locus tag: Dole_0879
• ID: 5693714
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1029874
• End bp: 1031775
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641263476
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001528766
• Protein GI: 158520896
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACTCA GCGCGTGGTT TAAAAAAAGA CCCGAAACCC AGGGCAGTGA CCTTGAACCG 
GTGGAGGTCG TGGCAGCCGT TACGGAGAGT TTTCCGGAAA CCGGCGGACC CGATCCTGCG 
CCGGCGGTGC TGCCGCCGGA GGGGCTTCGG CAGCTGTCGG TTGAAATTCC CGGCATAAAA 
GACGAAATGA AGACCTTTGT CGATGGGTCG GAAGGCGACT TCATGCTGCT GGGGATCAGC 
CTGCGGACCA TCCACGCCAA TGTGACGGAA CTCACCGACC TGATGCTGGA TACGGTCAAG 
CAGATGGGTG TCATGGACAA GGGCGGGTTT CTGGACCGGG GCCGCCGGAT TCTGGAGGCG 
TCTCTGGCCG AGATCGTGGC CCGGCAGAAC GAGGTGCGCA CCAACCTGGA ACGGATGAAC 
GGGGTGATGG ACAACCTTGA AACCCTCTAT GCCATCAGCA AGCAGATCAA GAAGTTTTCC 
CAGTCCCTGA AAACCGTGGC CCTGAACATG CTGGTGGAAA ATGCCCGAAG CATCGACCGG 
TCGGTTAACA TCTTCTCCGA CGTGGCCCAG GAGATCAAGG ACCTGTCGGT CAACATCGCC 
GGTATTGCCA ACGATGTTCA TAAGAACGTG GAAAAGGCCC GCACGGTCCA TCGTTCCACC 
CTGGAAGAGA TTGCCGGGGG TATCGGCCGG CTGGAGACCC TGACCGCGGA GATACGGACA 
ACGGTCCAGG AGTCGACGCA CAAGACCGAG GCCCTGCTGC GGTTCTCCGT GGATACCATC 
GATCAGGCAG GCCGGCGTTC CAGGGAGATA TCCCGGCAGG TGGCCGAAAT TGTGGTGGGT 
GTCCAGTTTC ATGACAACAT GCGGCAGCGG ATGCTGTATG TGGCCAACCG GCTCAACGCG 
GTGCTGTCCG CGGCGGTTGA TGGCGGCAGG CGTGCCCCCG GTCTGATAGC CGACAGGAAA 
CCGGCGCCGG AGATTATCGT CAACCAGGTC CACAGGATTG CCGGCATTCG GACTGAAATT 
ACCGAGGTGT ATGAGAAGAA CCGGTCTGCC CTGGAACGGA TCGGCCATGA AGTAGGGGAC 
CTGGTGCAGG GCATCAGCGG TACGGATACG GAATCAGAGG ACAGCGATCT TGCCGCTTTC 
CGGCATGACC CGTTTTCCCA TTTAAAAGGA GCCCTGACCC AGTTGCATGA CCTGCTCAAC 
CGGGGCGAAA GTTTTTACCG CCAGATTCAG GAGGCAGCGG CCCAGGTGTC CGGTATCGCC 
GCCACACTGT CGGAACTGCT GGGCCTGGTA AGAAGCATCA GCGCCAATAC GCATAACAAG 
GCCATTAATT CGATTATCGC GGCGGACCGG ATGGGGGAGC GGGGCGGCGC GCTTAAGATG 
CTGGCCAAGG AGATGAATGC CCTGGCCACC CGGTCCGACG GCCTCTCCTC CGAGGTGGAA 
CAGATCATCA CGGCCATTAT GACCGCTGCC GGGGAGATTC GGCAAACTGA GGCACGGGTG 
GCGCCGGATC CTGAGTCCGG GGCCATGTCC CGTCTCAACC AGGTGATTCA GGACATCTCC 
ATGGCTTACG AGGCGTTTCA GCAGGACTCC ATGGCCGCTT ATCAACGGGC GCGTGAGTTG 
AAGAAGGCGG TTGATACGAC CCTTTCCAGC CTGGATTTTT TCCAGGGGCT TTCCCGGCGC 
CTCAAAGGGT ATAGCGACCG CCTGGAGAAA ATATCCGCCT GCCCCGGCCT GGAAACGGTC 
CTTGTGGACG CGGACCTGGA AGCCGCGGGC CGCCTGCCCG GCAGGCACAC CGCCGACCGG 
GAGAACAATG TCATTCTGTT TGAAGGGGCG CGAAAGGGGG GCCGGGAGGA TGACAACGAA 
CCGGTCGATG AGGGGCTGGG AACCAACGTG GAGTTGTTTT AA 

 

Protein sequence

MRLSAWFKKR PETQGSDLEP VEVVAAVTES FPETGGPDPA PAVLPPEGLR QLSVEIPGIK 
DEMKTFVDGS EGDFMLLGIS LRTIHANVTE LTDLMLDTVK QMGVMDKGGF LDRGRRILEA 
SLAEIVARQN EVRTNLERMN GVMDNLETLY AISKQIKKFS QSLKTVALNM LVENARSIDR 
SVNIFSDVAQ EIKDLSVNIA GIANDVHKNV EKARTVHRST LEEIAGGIGR LETLTAEIRT 
TVQESTHKTE ALLRFSVDTI DQAGRRSREI SRQVAEIVVG VQFHDNMRQR MLYVANRLNA 
VLSAAVDGGR RAPGLIADRK PAPEIIVNQV HRIAGIRTEI TEVYEKNRSA LERIGHEVGD 
LVQGISGTDT ESEDSDLAAF RHDPFSHLKG ALTQLHDLLN RGESFYRQIQ EAAAQVSGIA 
ATLSELLGLV RSISANTHNK AINSIIAADR MGERGGALKM LAKEMNALAT RSDGLSSEVE 
QIITAIMTAA GEIRQTEARV APDPESGAMS RLNQVIQDIS MAYEAFQQDS MAAYQRAREL 
KKAVDTTLSS LDFFQGLSRR LKGYSDRLEK ISACPGLETV LVDADLEAAG RLPGRHTADR 
ENNVILFEGA RKGGREDDNE PVDEGLGTNV ELF