| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0847 |
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| Symbol | |
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| ID | 5693682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 988602 |
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| End bp | 990656 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641263444 |
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| Product | alpha amylase all-beta |
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| Protein accession | YP_001528734 |
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| Protein GI | 158520864 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCCCA CAACACCGGC CTTCGACAAA ACACAGACCG ACACAGTGAC CGCTCTTGTA
AAGCGGCTGC TGGAAAGGGA CGCGCTGCTG ACGCCCTATG CCCCGGTTCT CGAACGGCGG
CTGAGCCGCG TGCTGAATCT TGAAAAAACC CTGGCCGGTC CCCAGGGCCG GCTGGCCGAC
ATCGCCGCGG AATATGACTA TTTCGGGCTG CACCGGGAGC AGGACGGCTG GGTGTTCCGG
GAGTGGGCCC CCAATGCCAC GGCCATTTTT CTTATCGGCG AGACCAACGG CTGGCAGCCC
TCAAAGGATT TTGCCCTGGC CCGCATTCAG GACAACGGCA TATGGGAACT GCGGCTGCCC
GGCAACACCC TTTCCCACGG GCAGCTTTTC CGGCTCCTTG TCCAGTGGGA AGGCGGCCAG
GGAGACCGCA TTCCCTCTTA TGCCCGCCGG GTGGTCCAGG ATCCCCACAC CCTGATCTTC
AACGCCCAGG TGTGGGAAGC GCCGGCCTAT GAATGGCGCC ACGAACCACC GGATCTCAGT
TCCCAGCCGG CACTGATCTA TGAAGCCCAC GTGGGCATGG CCCAGCAGGA GGGCCAGGTG
GGCACCTTTG CCGCGTTTAC CGAAAAGGTG CTGCCCCGGA TCATCGACTC GGGCTACAAC
ACGTTGCAGC TCATGGCCAT TCAGGAGCAC CCCTATTACG GCTCCTTTGG CTACCATGTC
TCAAACTTTT TCGCGGTCTC GTCCCGTTTT GGTACGCCTG AAGACCTCAA GCAACTGGTG
GACACGGCCC ACGGCGCCGG CCTGCGGGTG ATCATGGACA TCGTCCACTC CCACGCGGTC
TCCAACGAGG TGGAGGGGCT GAGCCGGTTT GACGGCACCC TGCACCAGTA TTTTCACGAC
GGCCCCCGGG GGCTTCACAC GGCCTGGGAC TCCCGCTGCT TTGATTACGG CAAGGAGCCG
GTGCTGCGGT TCCTGCTGTC CAATTGCCGC TTCTGGCTGG AGGAATACCG GTTTGACGGG
TTCCGGTTTG ACGGCATCAC CAGCATGCTC TACCTGGACC ATGGGCTGGA AAAAGCCTTT
ACCGGGTATG ACGACTATTT TAACCACAAC GTGGACGAGG AGGCCCTGAC CTACCTGACC
CTGGCCAACC GGGTCATCCA CCAGGTCCGG CCCGACGCGA TCACCATTGC CGAAGACATC
AGCGGCATGC CGGGGCTGGC CACGCCCATT GGGGCCGGGG GCATCGGTTT TGATTTTCGC
CTGGCCATGG GGGTACCGGA CTACTGGGTC CGGCTGGTCA AGGAATACGC CGACGAGGCC
TGGCCCATGG GCCACCTGTG GCACGAACTC AACAACCGGC GCTATGACGA AAAATCGATC
AGTTATGCCG AGTCCCACGA CCAGGCCCTG GTGGGGGACC AGACCCTCAT GTTCCGCATG
GCCGGGGCCG CCATGTACCA TCACATGTGC GTGGATGATC CCGACACCAC TGTGGACCGG
GCCATGGCCC TTCACAAGAT GATGCGGTTT ATCACCCTGA CCACGGCCGG CCACGGCTAC
CAGAGCTTTA TGGGCAACGA GTTCGGCCAT CCCGAATGGA TCGATTTTCC CCGGCCGGGA
AACGCCTGGT CCTATCACTA CGCCCGGCGC CAGTGGCACC TGGCCGATGA CCCCGGCCTG
AAATACCACT TCTTACAGGC CTTTGACCGG GAGATGGTTG CCCTGGTCAG GCGCTTTTCC
GTGCTCGACG CCCCCTGGCC CTACCTGCTC TACGAACACA ACGACGACAA GATTCTCGCC
TTTTCCCGGG CCGGGCTGGT GTTTGTGTTC AACTTTCACC CCACCCGGTC CTACACCGAC
TATGCCATTC ACGCGCCCGC CGGCAAATAC ATCATGATTC TAAACAGCGA TGACGCGGCC
TTTGGCGGCC ACCACCGCCT GGCACCGGAC CAGGAACACC TCACCCTTCC CATGCCCAAC
ACCAAAACGG CCCACCGGCT CTTTCTCTAC CTTCCCACCC GCACCGCCCT GGTGCTGAAA
GCGGATAAGG CGTAA
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| Protein sequence | MDPTTPAFDK TQTDTVTALV KRLLERDALL TPYAPVLERR LSRVLNLEKT LAGPQGRLAD
IAAEYDYFGL HREQDGWVFR EWAPNATAIF LIGETNGWQP SKDFALARIQ DNGIWELRLP
GNTLSHGQLF RLLVQWEGGQ GDRIPSYARR VVQDPHTLIF NAQVWEAPAY EWRHEPPDLS
SQPALIYEAH VGMAQQEGQV GTFAAFTEKV LPRIIDSGYN TLQLMAIQEH PYYGSFGYHV
SNFFAVSSRF GTPEDLKQLV DTAHGAGLRV IMDIVHSHAV SNEVEGLSRF DGTLHQYFHD
GPRGLHTAWD SRCFDYGKEP VLRFLLSNCR FWLEEYRFDG FRFDGITSML YLDHGLEKAF
TGYDDYFNHN VDEEALTYLT LANRVIHQVR PDAITIAEDI SGMPGLATPI GAGGIGFDFR
LAMGVPDYWV RLVKEYADEA WPMGHLWHEL NNRRYDEKSI SYAESHDQAL VGDQTLMFRM
AGAAMYHHMC VDDPDTTVDR AMALHKMMRF ITLTTAGHGY QSFMGNEFGH PEWIDFPRPG
NAWSYHYARR QWHLADDPGL KYHFLQAFDR EMVALVRRFS VLDAPWPYLL YEHNDDKILA
FSRAGLVFVF NFHPTRSYTD YAIHAPAGKY IMILNSDDAA FGGHHRLAPD QEHLTLPMPN
TKTAHRLFLY LPTRTALVLK ADKA
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