Gene Dole_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0623 
Symbol 
ID5693452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp741536 
End bp742507 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content54% 
IMG OID641263214 
Producthistidine kinase 
Protein accessionYP_001528510 
Protein GI158520640 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGAA CCAAATGGCT GATCACCCTG ATCCTGATCT TTGTCTCCTC CTGCGTGGCC 
CTGGGATTTT CCCTGTTTCT CTACATCTAC TGGTACATCA AGGTGCGGGC GGGACTCAAC
CGGCTGGTGG ACCGGTTCGA CCTGAACGCG GTGGACATTC TGGCCTCCCA CACATGGGTG
GTGATCACCG TCCTGTCCAT CCTGGTGGGG ATCATCCTGC TGGGTCTTTT CACTATTTTT
ATTTACAACC TGAAAACCTT TCAGCTCTTC CGACTGCAAC GCAACTTCAT CAACAACTTT
ACCCACGAAC TGAAAACACC GGTCACCTCC CTGCGCCTCT TTCTGGCGAC CTTTTTAAAA
CATGACCTGC CCAGGGAAGA ACAGGTAAAG CACATTCAGA CTATGATCTC TGATGTCAAC
CGCCTGGAGT CCACCATCGG CAGTATTCTG GACCTGGCGG AAATCGAAGG CCGGACCTAT
GCCGGGGATT TTGTCGAAAC CGACCTGGTT TTTCTGATCC GGCAGTTTTA CCAGAAAACC
CGCCACCTGT TCAAAAACTG CGCCATCACC GTCTCGGCAC CGCCTGATGG ATCTTTCGTG
TGCCGCCTCA ACCCCCACCT GTTTGAGATG CTGCTGATGA ACCTTTCCAC CAACGCCATC
AAATACAACA GCGCCGGCAC ACCGGAAATC CATATCACCT TTGAACGGAA AAAGAACAAA
GTACTGGTCC GCGTGGCGGA CAACGGCATC GGCATTGACC CGTCGGAGCA GAAAAACATC
TTTAAAAAGT TCTACCAGGC CGGCCGGGCC GATGACCGGT CAGCCAAGGG AAGCGGCCTG
GGCCTCTACC TGGTGGCCAA CATCGTGCGC CTGCACAAGG GGAAAATATG GGTGAAAGAC
CGTCCCGGTG AAACGGGGTC CGTGTTTGTC GTCTCCCTGC CCCTGGTGAC AAAACCAAAG
GATCCGGCAT GA
 
Protein sequence
MNRTKWLITL ILIFVSSCVA LGFSLFLYIY WYIKVRAGLN RLVDRFDLNA VDILASHTWV 
VITVLSILVG IILLGLFTIF IYNLKTFQLF RLQRNFINNF THELKTPVTS LRLFLATFLK
HDLPREEQVK HIQTMISDVN RLESTIGSIL DLAEIEGRTY AGDFVETDLV FLIRQFYQKT
RHLFKNCAIT VSAPPDGSFV CRLNPHLFEM LLMNLSTNAI KYNSAGTPEI HITFERKKNK
VLVRVADNGI GIDPSEQKNI FKKFYQAGRA DDRSAKGSGL GLYLVANIVR LHKGKIWVKD
RPGETGSVFV VSLPLVTKPK DPA