| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0618 |
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| Symbol | |
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| ID | 5693447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 733876 |
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| End bp | 735723 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641263209 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_001528505 |
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| Protein GI | 158520635 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACCTC ATGCCGACCC ACAGACCACA GCCTCTCAAC AGGGCCAGAC CCTCTGGTCC
GGCCTGGTCG CAACGGACCG GGAGACATTC TTTTCTTCAT GGCTTGCGAT TCAGTGCTCT
CTGATTCGGG AATGCCGCCA GGCGGTCCTG GTGCTTGGCG AACCCGGTAC CGGGCAGTAT
CTTCCCGTAG CGGCATGGCC TGAAGGCGGA AACGAGGGGG AGCGCCTGGC CGATGTTCTG
GACCAGACCC TGGCCGAGCA GGAAGGTATG CTGGTCGGAC TTGAGCCCGT GGAGGGCGTT
GCCTGTTACG GACTTGCCTA TCCCATAAAG GTGGATGGCG AATGTGTGGG CGCCGTGGCC
GCCGAGGTGG CGGCAACCCG CGAAGACCGG CTTCGTCCTG CCATGGAGAG CCTTCAGTGG
GGGGCGATCT GGATCGAGAA CTGGTACCGC CGGCGCCGCA ACCTGGAAGA CGGTGATATT
CTCACCCGGC TCAAGGGAGC GGTGGATATT CTGGCCGGCG TACTGGCGGA AACCCGCTTT
GACGGTGCCG CCATGGCCTT TGTGACGGCG GTTGCCACGC GGCTCAACTG CGACCGGGTC
AGCCTCGGCC TGATTCGGAA AAAATTTGCC CATGTGGCGG CGGTCTCCCA CTCCGCCGTG
GTGGGCCGGA AGATGAACCT GCTTCGGGCC ATCGGCGCGG CCATGGACGA GGCGGTTGCC
CAGCGCGCCG AAATTACCTA CCCCCCCCCT CCCGAGGCCC AGCCCTTTGT TCTGCGCGAT
CACGAACACC TGGCCCTCAA GCACGGCACC CAGGCCATCC TTACAATACC GCTTCACGGC
GGGGACCGGT ACTACGGCGC CGTCACCCTG GAGCGACAGA AAGACCGGCC TTTTACCGCC
GATGAACTGG CCTATGTTAA AAGCATTGCC GCGCTTTCCG GGCCGGCCCT GGAAAGCCGG
CACCACCAGG ACCGGCCTGT GGTGGTGCTG GCCTTCCAGG CCCTGAAGCG CCAGGCGGCC
AGATTGCTGG GTGCCGGGTA CACCGGCAGA AAGGCAGTGG CGGCGGCCCT GCTGCTGACG
GCTCTGGTGC TTACCTTTGC CAGGGGGGAT TACCGGATTT CAACGGATAT GGTGCTGGAG
GGGGCCGTGC AACGATCCGT GGTGGCCCCT TTTGACGGGT TTATCGCGGC GGCACCGGCC
CGAGCCGGAG ACGTGGTGGT GGCGAATGAC CTGTTGTGCG CCCTGGACGA CCGGGATTTC
CGGCTGGACC GAATTCACTG GCTGGGCCGG ATGAATCAGT ACCGCCGCCA GCTTCAGGAC
GCCGTGGCCC GTGGCAACCG GGCCGAAGCC AACATCATTC AGGCCCAGCT GGATCAGGCC
GCGGCCCAGC TGGAAATGGC GGAAACCCGT CTTGAACGTG TCGGCCTGCG AGCCCCCTTT
GCCGGCGTGC TGCTCAGCGG CGACCTGACC CAGCGGCTGG GCGGAGCCGT TCGCCAGGGA
GAGGAGCTTT TTCAGATCGC CCCCCTGGAC GCCTACCGCG TGATTCTCAA GGTCAATGAA
CGCCGCATTA CCGATGTGGT CGAAGGGCAG TCCGGCACCC TGGTTCTTTC GTCCCTGCCG
GAAGAGACCT ATGGTTTTAC GGTGACAAAA ATTACGCCCG TGACCACCCC CGAGGAAGGC
AACAACTATT TTCGCGTGGA AGCCGCTTTG GACTCGCCGT CGCCATTGCT TCGTCCGGGC
ATGGAGGGGG TGGGTAAAAT TCACGTGGAC CGGCGGCTTC TGGTGAGCAT CTGGACCCGG
CCTCTTTTTG AATGGGTGCG GATCAAGATA TGGTCCTGGT GGCCCTGA
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| Protein sequence | MGPHADPQTT ASQQGQTLWS GLVATDRETF FSSWLAIQCS LIRECRQAVL VLGEPGTGQY
LPVAAWPEGG NEGERLADVL DQTLAEQEGM LVGLEPVEGV ACYGLAYPIK VDGECVGAVA
AEVAATREDR LRPAMESLQW GAIWIENWYR RRRNLEDGDI LTRLKGAVDI LAGVLAETRF
DGAAMAFVTA VATRLNCDRV SLGLIRKKFA HVAAVSHSAV VGRKMNLLRA IGAAMDEAVA
QRAEITYPPP PEAQPFVLRD HEHLALKHGT QAILTIPLHG GDRYYGAVTL ERQKDRPFTA
DELAYVKSIA ALSGPALESR HHQDRPVVVL AFQALKRQAA RLLGAGYTGR KAVAAALLLT
ALVLTFARGD YRISTDMVLE GAVQRSVVAP FDGFIAAAPA RAGDVVVAND LLCALDDRDF
RLDRIHWLGR MNQYRRQLQD AVARGNRAEA NIIQAQLDQA AAQLEMAETR LERVGLRAPF
AGVLLSGDLT QRLGGAVRQG EELFQIAPLD AYRVILKVNE RRITDVVEGQ SGTLVLSSLP
EETYGFTVTK ITPVTTPEEG NNYFRVEAAL DSPSPLLRPG MEGVGKIHVD RRLLVSIWTR
PLFEWVRIKI WSWWP
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