Gene Dole_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0600 
Symbol 
ID5693424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp670455 
End bp671006 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content52% 
IMG OID641263186 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_001528487 
Protein GI158520617 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000223 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAATT ATGTTATTCA GAGGCGTTAT GCAAAGGCCT TGTTGCTGAT CGGCAAGGAG 
GACAACAATG CCGAGCAGTA CAAGGAGGAG TTGAACGGCT TTGTCTCCGT TCTGGACATG
GAAAAGGCGT TTGAAAGCGC CATCACCAAC CCGCTTTACC CGGTGGAAGC CCGGCGCAAG
GTGCTGGACA TGGTCATTGA AAAGCTCGGC GTGTCGGTCA TGATGCGATC GTTTCTGGCC
CTGCTTTTTG AAAAACGGCG CATTCAGCAT GTGCGGGGCA TCAACGAGGT GTACCAGAAT
CTGGTGGACG AGCTCAAGGG GATTGTGCGG GCCGACGTGG TTTCCGCCGG CGAACTGTCC
GACGATGTGG TTGAAAAGAT TCGCGCCTCG CTTTCAAAGA TGACCGGCAA ACAGGTGATT
GTCGATATCG CTCAGGATCC GACCCTGATC GGGGGTATCG TGACAAAGGT AGGGGATATG
GTACTGGATG GCAGCATCAA GACCCAGTTG TCAAATATGA AAGAATCTTT AAAAAAGGGT
GAGAGAGTCT AA
 
Protein sequence
MKNYVIQRRY AKALLLIGKE DNNAEQYKEE LNGFVSVLDM EKAFESAITN PLYPVEARRK 
VLDMVIEKLG VSVMMRSFLA LLFEKRRIQH VRGINEVYQN LVDELKGIVR ADVVSAGELS
DDVVEKIRAS LSKMTGKQVI VDIAQDPTLI GGIVTKVGDM VLDGSIKTQL SNMKESLKKG
ERV