| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0548 |
|---|
| Symbol | |
|---|
| ID | 5693372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 614305 |
|---|
| End bp | 614571 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641263134 |
|---|
| Product | FmdB family regulatory protein |
|---|
| Protein accession | YP_001528435 |
|---|
| Protein GI | 158520565 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000145953 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCT ACGAGTATGA ATGCACCAAA TGTGGAAAAA TCCACGAGGC ATGGCAGAAG
ATCAACGACA AGCCGCTGCA GCGGTGTGAC GCCTGTTCAG GCAAACTTCA CAAACTGATT
TCCCACAGCG CTTTTCATTT AAAGGGTTCC GGCTGGTACG TGACCGACTA TTCAGGCGGC
GCAAAACCGG GCGCGTCAAC GTGCCAGGCA TGCGAATCAA CGCCGGCTGC ATCCAAGGAA
AAAAGCGGCT CGTCTAAAGA TAAATAA
|
|---|
| Protein sequence | MPIYEYECTK CGKIHEAWQK INDKPLQRCD ACSGKLHKLI SHSAFHLKGS GWYVTDYSGG
AKPGASTCQA CESTPAASKE KSGSSKDK
|
|---|
| |