Gene Dole_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0502 
Symbol 
ID5693324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp569571 
End bp569987 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content53% 
IMG OID641263086 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_001528389 
Protein GI158520519 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGCA TACTGATAGT CACCCATGAA AAGCTCGGCG ACGCATTGAT CGAAGCGGCC 
CAGTTTATTC TCGGCTCAAA GCCCGAAAAA CTCGCGGCGG TCTCCATCGA CCTGAACGAA 
AACGCGGACA AGCTTCGCAA AAAAATCGCC GACGGTATAA AAACGGTCAA AGGGGAAAAC 
GGTGTGCTGA TTCTTACCGA CATGTTCGGA GGATCCCCGT CAAACCTGAG TTACTCCTTT 
CTTGAAGAGG GGCAGGTGGA GGTGCTGTCC GGCGTGAATC TGCCAATTCT CATCAAGGCG 
ATACGGATTC GGCAGGACAT GCCGCTGGCC GACCTGATCC TTACGGTGGA AGCGTTCGGC 
AAGAAAAGCA TCTCCATTGC CAGCAGCATT TTAAAAGGCA ACAAGCGTGG CGAATGA
 
Protein sequence
MIGILIVTHE KLGDALIEAA QFILGSKPEK LAAVSIDLNE NADKLRKKIA DGIKTVKGEN 
GVLILTDMFG GSPSNLSYSF LEEGQVEVLS GVNLPILIKA IRIRQDMPLA DLILTVEAFG 
KKSISIASSI LKGNKRGE