| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0414 |
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| Symbol | prfC |
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| ID | 5693233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 476184 |
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| End bp | 477779 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641262995 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001528301 |
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| Protein GI | 158520431 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTG AAAATAAAAT TTCTCAGCGG CAGATCAACC GGCGCCGCAC CTTCGGCATT
ATCAGCCATC CCGACGCCGG CAAAACCACC CTGACCGAAA AGCTGCTGCT GTTCGGCGGC
GCCATTCAGA TGGCCGGCGC GGTCAAGGCC CGCAAGGCCG GCCGCCACGC CACCAGCGAC
TGGATGGCCA TTGAGCAGGA GCGCGGCATC TCAGTGACCA GCTCGGTGAT GAAGTTCGAC
TACCGCGACT ACGAGATCAA CCTGCTGGAC ACTCCCGGCC ACCAGGACTT TTCCGAAGAC
ACCTACCGGG TGCTCACCGC CGTGGACAGC GCGGTGATGG TGATCGACAG CGTCAAGGGC
GTGGAGACCC AGACCCGCAA GCTGATGGAG GTGTGCCGGA TGCGCAACAC CCCCATTCTC
ACCTTTGTCA ACAAGCTGGA CCGGGAGGGC CTGTCGCCCA TCGATATTCT GGGCGATATC
GAAGACAAAC TCCAGATCGA GTGCGCGCCC CTCTCCTGGC CCATCGGCAT GGGCAAACGG
TTCAAGGGAA CCTACAACCT TCATCGCGGC GAGCTGGTCC TGTTTACCCC CGGCCAGGAG
CGCCTGACCG GCGATACGGT GACCATTCAA AATCTGGACG ATCCCCTGCT GGACCAGGTC
CTGGGCAGCC AGGCCGACCA GTTGCGCGAA GACGTGGCCC TGCTGGAAGG CGCGGCCACC
CCCTTTGACC TGGACTATTT TTTAAAAGGG GGCCAGACCC CGGTCTTTTT CGGCAGCGCC
ATCAACAACT TCGGTGTGCG CGAGCTTCTG GACACCTTTG TGGAGATCGC CCCCGGCCCC
CAGCCCCGGG CCGCCGTTAC CCGCACCGTG ACACCGGATG AGCCGGCCTT TTCCGGGTTT
GTGTTTAAAA TTCAGGCCAA CATGGACCCG GCCCACCGGG ACCGGATCGC CTTTCTGCGG
GTCTGCTCGG GCCGGTTTGT GCGGGGCATG CGGGTGCGCC ACCACCGCAT CGGCAAGGAG
ATTCAGATCG CCAACCCCAT CATCTTCATG GCCCAGGACC GGGCCTTTGT GGAAGAGGCA
TGGCCGGGCG ACATCATCGG CATTCACAAC CACGGCACCA TTCGCATCGG CGACACCTTT
TCGGAAAAAG AGCCCCTGGC CTTTACCGGG GTCCCCAATT TCGCGCCCGA GCTTTTTCGC
CGGGTGATAT TGCGGTCGCC CTTAAAGGCA AAACAGCTTC AGAAAGGTAT TGATCAGCTG
GTGGAGGAGG GGGCCATTCA GGTGTTCCGG CCCCTGGCGA ACAACGCCAT CATTCTGGGG
GCCGTGGGCG TCTTGCAGTT CGAGGTGACC ATGGCCCGGC TCAAGGCCGA ATACGGGGTG
GATGCCGTTT ACGAGCCGGT GGATTACAGC GTGGCCCGCT GGGTCCACTG CGATGACCGC
AAGCTGCTGT CGCTGTTTGA AAAGGACCGC CAGGCCAACC TGGCCCGCGA CGCCGAGGGC
AACCTCACCT ACCTGGCCCA GAACGAATGG CAGTTCAACT ACATGGCGGA AAAGTGGCCG
GACATCGGGT TTTCAAAAAC CCGGGAGTGC CAGTAG
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| Protein sequence | MKTENKISQR QINRRRTFGI ISHPDAGKTT LTEKLLLFGG AIQMAGAVKA RKAGRHATSD
WMAIEQERGI SVTSSVMKFD YRDYEINLLD TPGHQDFSED TYRVLTAVDS AVMVIDSVKG
VETQTRKLME VCRMRNTPIL TFVNKLDREG LSPIDILGDI EDKLQIECAP LSWPIGMGKR
FKGTYNLHRG ELVLFTPGQE RLTGDTVTIQ NLDDPLLDQV LGSQADQLRE DVALLEGAAT
PFDLDYFLKG GQTPVFFGSA INNFGVRELL DTFVEIAPGP QPRAAVTRTV TPDEPAFSGF
VFKIQANMDP AHRDRIAFLR VCSGRFVRGM RVRHHRIGKE IQIANPIIFM AQDRAFVEEA
WPGDIIGIHN HGTIRIGDTF SEKEPLAFTG VPNFAPELFR RVILRSPLKA KQLQKGIDQL
VEEGAIQVFR PLANNAIILG AVGVLQFEVT MARLKAEYGV DAVYEPVDYS VARWVHCDDR
KLLSLFEKDR QANLARDAEG NLTYLAQNEW QFNYMAEKWP DIGFSKTREC Q
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