Gene Dole_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0331 
Symbol 
ID5693150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp380636 
End bp381271 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content50% 
IMG OID641262912 
Productpilus assembly protein PilO 
Protein accessionYP_001528218 
Protein GI158520348 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3167] Tfp pilus assembly protein PilO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0217389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATC GTTTTGAAAA ATACTCGGAG TCCATGAAGC CGGTATTCGA GGCCGTTTCG 
AGCCTCACCA TGATCCAGCG CATTCTTATC GTGGTGGTGG TCTTTGCCCT GTTGATCGGC 
AGTTTCGTGT TTTTCTCTTA CATGCCCAAG TACAAAGACA TCGCCAAAAT AGACAAGCAG 
TATGAAACGG TGGCAAAAGA GCTGAACGTT GCCAAACAGA AGGCTGCCCA GCTTGGGGCA 
CTTCAGGAAG AGTGGGCCGA AAAGGAAGAG AAATTCAAAC TGGTCATGGC GGCGCTTCCG 
GACAAAAAGG AGATCCCCTC TCTGCTGTCC GAAATCTCCA GAGCCGGTAA CAGCGCTGGA 
CTGGAGTTCA CCCGGTTTGT TCCCCAGCAG GAAAGTATCC GGGATTTTTA CGCCGAGATT 
CCCGTGGCCA TCAGCATCAC CGGCCCCTAC CACAGCATCT CCCTGTTTTT TGAAAAAATC 
GCCGAAATGT CACGCATCGT GAATGTGCGG GGCATAAACA TAAGTGCCAG TAAAAACGCC 
GAGGACACGC TTTCCACGCA GTGCACCACG GTGACGTACC GATTTCTGTC ACCGGCAGAA 
CAGGCAAAAA CACAACCCAA AGGTAAAAAA AGATGA
 
Protein sequence
MKNRFEKYSE SMKPVFEAVS SLTMIQRILI VVVVFALLIG SFVFFSYMPK YKDIAKIDKQ 
YETVAKELNV AKQKAAQLGA LQEEWAEKEE KFKLVMAALP DKKEIPSLLS EISRAGNSAG 
LEFTRFVPQQ ESIRDFYAEI PVAISITGPY HSISLFFEKI AEMSRIVNVR GINISASKNA 
EDTLSTQCTT VTYRFLSPAE QAKTQPKGKK R