Gene Dole_0274 details

Gene Information

• Locus tag: Dole_0274
• ID: 5693092
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 312270
• End bp: 314300
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641262854
• Product: radical SAM domain-containing protein
• Protein accession: YP_001528161
• Protein GI: 158520291
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1533] DNA repair photolyase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTACA AAACCAGACG TGAAGAGCCA TCAGCAATCA TGGCCTCACC TGAATCTTCT 
GTAAAGCCCG ATCACATCAA GATTATCAAG GGCTCTACCG ACATCCTGCT CATCGCTCCC 
CACGCTTGCA TTCGGGACGG TAAGCCCAAG GACGACGAAA ACACGGGACC CATTACAGAG 
ATGGTGGCAC ATCAAATCGG ATGCTCGGCC ATCATCAATA CCCATTTTCA CAAACCCGAC 
TCGAAAAAAT ACCCTCGTGG CATGGGAAAG GGCAACTTGG ACTTGAATGT CATTGCCGAT 
GCTGAAATGG TACCGGGTTA TTTGGATGCG ATACGTGCTG TTGTCGAGGC ACCAGGTAAA 
ACGACGGTGA TTTGGATTCA CGGGGCCGAC AACGCAAATG CTATTGAAGT TGCGTCCGAG 
GCTACTTACG ATTTCCCAGG GGACGAAATC CACGCCTTCA TCGGCTATGG CCAAGGTGGG 
AGCCGCCCTA AAAGCGGGTG CAAAAACCTA TTTACCGCAA AACCGGAAAC AGTAGAGCGG 
TTCCGTGATG CCCTCATCAG CAATAGAATG AATGCTGTGC TCACCGATAA AGATGCCGTC 
AACTACCGGG GCCGTAGAAC AAAGGGGATG AACCAGTGGT TCCTGAATCA AGAATACACC 
CTGGACCAAG TGGAGTCCAT ACAACTGGAA ATCCGCAAAG CAGGCTTCCG AGACCTTCAT 
CATAACATCG AGAAAACGGC CGGCATCCTG ATTGAAGCAT TGAGCCAGGA AGCACTGGTT 
CCAGTTATTC CAGAGGAAAC CGTAGCCGAC GAACACCTGG TGGACATTGC CTTCAACCAC 
CTTCGAGGCA TCTTCGCCAA GCACATACAC GAGGCGATGC TTCAAGCCGG TCGGTATTTG 
GTGCGGACCT TTTACGGCAC CTATGAAAAA GCCCGAAAGA AAGAGAAAAT CCGAAAACAG 
TCGTTCGCCA AACTCGAAGA GAGGCTGAAC AATGGCACCG GCGATGTTCC CAAAAAGACC 
TGGATTTACG ATGCCGTCAA GGTGGCCGTA GACGATCACT TTTTCAGAAA GGAAAGCAAA 
GCATTTTTCC TGACGTACGG AAAACTTGGA CACAGCCAAA AGGTCCTGCT TACCCAAGTC 
AAAGATACAA ATCAAAAAAA GGAGTTAGTG GAAAAGGCTG TTGAGACGCC ACAGACCGTA 
AAACAGTTCC GAGAAAGCAT CCAGGCCATC AAGAAAAAGA AGCGGAAATC AAAGCGTAAA 
GGCGGACATA GCGATTGGAC AAAGCCAGAA AACAACGTCA GTTTTTGTAG TGGCTGTGAA 
AATGACTGTA TCTATTGCTA TGGACGATAC TTTGCCGCCA ATCGAAATCA AATAGCCCCA 
AATCACTGGT CTAAAATGAA AATAAGGGAG CATCATGTTA CAAAAAAACG AACATTACAT 
GCAGGGCTGA TTGGCTTTCC ATCAACGCAC GACATTCTTC CCAGCAATCT CGACGCCACG 
CTCCTTGTCT TGGGAAAACT TTTACGAGCC GGAAACAAAG TGCTGATTAT GTCTAAGCCC 
CGGCTTGACT GTATCAAAAG ACTCTGCTCG GCCTGTGAGT TTTTCAAAGA CACAATTCTG 
TTTCGTTTTA CCATTGGGGC AATGGACGAT GATATCCTTG GCTTCTGGGA ACCCAATGCC 
CCGACCTATG AGGAACGAAA GGAATGCTTG GCATACGCCC GCAATCAAGG ATTTCAGACT 
TCGGTCAGTA TGGAGCCGAT GCTCGATACC GAAAATCTGG ATGCGTTGAT AAAAGCTTTG 
CGACCTTTGG TGTCAGATAA AATCTGGCTT GGAACAATGG AGTACTTGGG TTGGATAGGA 
ACCCGTATCA AGGCCGATTC CAAGGGCGAG TTAGAAAGAC TGGAACAGGG GCAAACACCG 
GATAAGCTAG TGTCCATCTT CAACAGATAC GAAGACGATC CAATGATTGA GTGGAAAACA 
GTAGCGTTGA AAATAATAGA AGCCCATAAA CAACAGGAGA GAAAACCATA A 

 

Protein sequence

MAYKTRREEP SAIMASPESS VKPDHIKIIK GSTDILLIAP HACIRDGKPK DDENTGPITE 
MVAHQIGCSA IINTHFHKPD SKKYPRGMGK GNLDLNVIAD AEMVPGYLDA IRAVVEAPGK 
TTVIWIHGAD NANAIEVASE ATYDFPGDEI HAFIGYGQGG SRPKSGCKNL FTAKPETVER 
FRDALISNRM NAVLTDKDAV NYRGRRTKGM NQWFLNQEYT LDQVESIQLE IRKAGFRDLH 
HNIEKTAGIL IEALSQEALV PVIPEETVAD EHLVDIAFNH LRGIFAKHIH EAMLQAGRYL 
VRTFYGTYEK ARKKEKIRKQ SFAKLEERLN NGTGDVPKKT WIYDAVKVAV DDHFFRKESK 
AFFLTYGKLG HSQKVLLTQV KDTNQKKELV EKAVETPQTV KQFRESIQAI KKKKRKSKRK 
GGHSDWTKPE NNVSFCSGCE NDCIYCYGRY FAANRNQIAP NHWSKMKIRE HHVTKKRTLH 
AGLIGFPSTH DILPSNLDAT LLVLGKLLRA GNKVLIMSKP RLDCIKRLCS ACEFFKDTIL 
FRFTIGAMDD DILGFWEPNA PTYEERKECL AYARNQGFQT SVSMEPMLDT ENLDALIKAL 
RPLVSDKIWL GTMEYLGWIG TRIKADSKGE LERLEQGQTP DKLVSIFNRY EDDPMIEWKT 
VALKIIEAHK QQERKP