Gene Dole_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0196 
Symbol 
ID5693013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp214273 
End bp215442 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content60% 
IMG OID641262775 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001528083 
Protein GI158520213 
COG category[C] Energy production and conversion 
COG ID[COG1140] Nitrate reductase beta subunit 
TIGRFAM ID[TIGR03478] DMSO reductase family type II enzyme, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTG ATGAAAAAGT CCTTACAGAC AGGGAAAAGG AGCTGGCCGC GGCCTTTGAG 
GAGACCAAGG AGATGCTGCG CAAGTCCAAT CGCCAGATCG GCATGGTGAT GGATTTGAAC
AAGTGCATCG GCTGCCAGCT GTGCTCCATG GCCTGCAAGA CCTTGTGGAC CAGCAAGGAG
GGTCGGGAGT ACATGTGGTG GAACAAGGTC AACACCATGC CGGGCAAGGG CTCGCCCAAA
GACTGGGAGA AGATGGGCGG CGGCTACAAG GTCAAGTTCG GCGGCAAGGT GATGGAACCG
GTCCAGGGCA AGCACCCCAC CCGAAAAGAG TTCGGCGACA TGTGGGACTA CAACTGGAAC
GACGTGGTGA ACAACAAGGC CGGCGCGGTC CACCTGCAGG CCAAAAACCA GACCGACGGC
AGCGTGCCGG ACTGGTCCAT GAACTGGGAC GAGGACCAGG GCGCCGGCCA GTATCCCAAC
GGCTTTTATT TTTATCTGCC CCGCATCTGT AACCACTGCG CCTATCCGGC CTGCGTGGAT
GCCTGTCCCC GGAACGCCAT CTATAAGCGG GACGAGGACG GCGTGGTGCT CATCGACCAG
GACCGGTGCA AGGGGTACCG CTTCTGCCTG GAGGCCTGTC CCTACAAGGT CATCTATTTC
AACTTTCTCA CCGACACCAG CATGAAGTGC ATCTTCTGCT ACCCCCGGCT GGACGAGAAG
GTGGCCAATG CCTGTGCCCG TCAGTGTACG GCCCGGGTCC GATGGATCGG CTACACCGAG
GAGCCGGAGA GCATTATCTA CAAGCTGACC AAGGTGTGGA AGGTGGCCCT GCCCCTTCAC
GCCGAGTACG GCACCAACCC CAACGTGTTT TACGTACCCC CCCTGGCGCC CCATCGGCTG
GCGCCGGATG GCAAGATCGA TCCTTCCAAA CCCCGTATTC CCAGGGAGTA CCTGCGGTAC
CTGTTCGGGC CTGAGGTGGA TGCCTCCCTG GACATTATGC AGAAAGAGCT GGACAAGGTG
CGGGCCGGCG GCCGCTCGGA ACTGATGGAG ATCCTCAAGG CCAAGGAGTG GAAGAGCATG
TTCGGCGAGT TCACCAAGGA TCCGGCTGTT ATGGATCGCA AGCCGCCCAA GGGCGTGACC
TTTGTCCGGG ACGGCATCAT CACGAAATAG
 
Protein sequence
MAVDEKVLTD REKELAAAFE ETKEMLRKSN RQIGMVMDLN KCIGCQLCSM ACKTLWTSKE 
GREYMWWNKV NTMPGKGSPK DWEKMGGGYK VKFGGKVMEP VQGKHPTRKE FGDMWDYNWN
DVVNNKAGAV HLQAKNQTDG SVPDWSMNWD EDQGAGQYPN GFYFYLPRIC NHCAYPACVD
ACPRNAIYKR DEDGVVLIDQ DRCKGYRFCL EACPYKVIYF NFLTDTSMKC IFCYPRLDEK
VANACARQCT ARVRWIGYTE EPESIIYKLT KVWKVALPLH AEYGTNPNVF YVPPLAPHRL
APDGKIDPSK PRIPREYLRY LFGPEVDASL DIMQKELDKV RAGGRSELME ILKAKEWKSM
FGEFTKDPAV MDRKPPKGVT FVRDGIITK