Gene Dole_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0111 
Symbol 
ID5692926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp121952 
End bp122761 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content57% 
IMG OID641262688 
ProductRimK domain-containing protein ATP-grasp 
Protein accessionYP_001527998 
Protein GI158520128 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGG TTTCTTTCGA TCCCCTTCAG ACCCTGGACA TTCCCGGTGT GCGGACCATC 
AAGCCGGCGC ACTGGTTCCG GGAAAAAGAG ACCGTCAAGT CGGCCGACTG GATTCTTTAT
CCTGAATACT GGCAGGTCAA CCCCCTGTAT TATGGCCTTA AAAAACGGAT ATTTCCCAGC
GTCAGCACCT ATCACATCGG CCACGACAAA ATTGAAATGG CCAGGGCCTT TGAGGCGGTC
TGCCCGGAGA ACGCTCCTGT CACCCGGATC CTGTCACGCA ACGAATACGC CACAGAGCAG
ATTCTTGATG AGTTCGATTT TCCCTTTGTG GCAAAAGAGG TGAGAAGTTC CATGGGGGAA
GGGGTTTTTC TGATCACCGA CAAAAAGGCG TTGAAGGCCT ATGTGGACCG CAACGACACC
CTTTTTGTCC AGGAGTATCT TCCCATCAGC CGGGACCTGC GGGTGGTGGT GGTGGGAAAG
TCGGTTGTGG CCGCCTACTG GCGCCAGGCC CCGGACGGGG CTTTCTGCAA CAATGTGTCC
AGGGGCGGAA CCGTCTGTTT TGAGGACATC CCCGACAGCG CCCTTGGCCT GGTGGAAAAG
GTGGCCATTG AACTGGATAT CAACCATGCC GGGTTTGACG TGGCCGTGGT GGACGGACAC
TGCTTTCTTC TGGAGTTTAA TCCCCGGTTC GGCACCCAGG GCCTGATTAC CAGGGGTATT
CGGCTGGGAA GGGTGGTTCT GGACTACCTG ATCGAAATGA GCCGGCCCCC GGAAGTGCCC
GGCAATCCCC GGTTGCCCCG GGCCGGGTGA
 
Protein sequence
MRLVSFDPLQ TLDIPGVRTI KPAHWFREKE TVKSADWILY PEYWQVNPLY YGLKKRIFPS 
VSTYHIGHDK IEMARAFEAV CPENAPVTRI LSRNEYATEQ ILDEFDFPFV AKEVRSSMGE
GVFLITDKKA LKAYVDRNDT LFVQEYLPIS RDLRVVVVGK SVVAAYWRQA PDGAFCNNVS
RGGTVCFEDI PDSALGLVEK VAIELDINHA GFDVAVVDGH CFLLEFNPRF GTQGLITRGI
RLGRVVLDYL IEMSRPPEVP GNPRLPRAG