Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_958 |
Symbol | |
ID | 8657890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 892018 |
End bp | 892800 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | carbon-nitrogen hydrolase |
Protein accession | YP_003330405 |
Protein GI | 270308347 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGAA TTATAAAAGT AGCCATGTTG CACATTGAAC CCAGAACAGC GGATATAGAC ACGAACCGCA CCTTAATATC CAATGCCCTC CGTAAAGCTG CTCAGGCCGG GGTAAAATGG GTACTCACGC CAGAGATGGC TGTTTCAGGC TATTTTTTTG AAGAAGTTAT CGGTACAAAA TGGATATCCC CCCAACCTGA CTCTTGGCTT AAAAAGATAT TGGAGTTATG CAAATCTTTA GATGTGGGGT TGTTCCTTTC CTACCCTGAA AAAGACCCAT CAAACGGCAA ATGCTATAAC TGTCTGTTTG CTGTAAACCG CCAGGGAGAA CTTGTCGGCA AACACTGCAA AATAGAGGTA CACCCCGGTA CAGAAGAAGG CTGGTCAAGC CCCGGATGCC GCCTTTCCGT CTTTGAAATG GACGGTTGCA AGCTGGGTAT GCTTATCTGC GCAGATACCT ACGATGGTGA ACATGCCAAG ATACTTGCAA AACATGGTGC CGAAATTATT ATTGCGGCTG CAGCCTGGGG AAATAAATAC CCGCCGGAAG AGCGCTGGAA AAAACGTTCA GCTGAAACAG GCCTGCCGCT TTGGGTTTGC AACCGCACAG GCAAAGAAAA CCAGGTGGAT TTCACTCAAG CCAGAAGCGT GGTAGTTGAA GACGGGTGTG AAAAGCTGGT TTACCTTGGA GAAACCCCTG CCATGCTTGT TTATGATTTT GATACGGCTA CCAAAAAAAC CCTCAGCCGA TCTTTCACGG TTATTGACAT GCCCCTGCTA TGA
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Protein sequence | MTRIIKVAML HIEPRTADID TNRTLISNAL RKAAQAGVKW VLTPEMAVSG YFFEEVIGTK WISPQPDSWL KKILELCKSL DVGLFLSYPE KDPSNGKCYN CLFAVNRQGE LVGKHCKIEV HPGTEEGWSS PGCRLSVFEM DGCKLGMLIC ADTYDGEHAK ILAKHGAEII IAAAAWGNKY PPEERWKKRS AETGLPLWVC NRTGKENQVD FTQARSVVVE DGCEKLVYLG ETPAMLVYDF DTATKKTLSR SFTVIDMPLL
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