| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_935 |
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| Symbol | |
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| ID | 8657867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 868146 |
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| End bp | 871826 |
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| Gene Length | 3681 bp |
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| Protein Length | 1226 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | sensor histidine kinase |
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| Protein accession | YP_003330382 |
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| Protein GI | 270308324 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAACA TTCGCAAAAC CAATGCCCAG CTGGTTGCAG AGCTTGAAGA TCTGCAGTGC
CGCTACGATA AACTGCTTTC AAACCAGGTC GCTCTTTGTT CTTCCGAAAG AGTATCTTCG
GGTGCGTCTT TTCAGATTTT AAGTAATACT TGCGGTACAT CTTCCGGGGG TTTTGTACAG
GAAAATGCAA TGGATGCCCT AGAAGCTTGT TGCCGTATTG CGGAAACTGC AGGTGAGGGA
GTAATACTCA CGGATGCCGC AGGACGGATA ACGCTGGTTA ATCCCCGTTT CAGCCAAATA
TCCGGCTATC CGCTTGATGT ACTAAAAGGC AAAAGTATAT TTGAACTTGC AGGCAAATCC
TATATATCAA TTCTTCTTGC CCAATGGGAA AGGCATAAAA AAGGTGTTTC ATCCCGCTAT
GAGCTTCAGC TAAGGAAGGG TAACGGTCGT TTGGTCTGGG TAGTTTTCCA CGTTTCAGTG
CCATTCGGGA AGGGTAACAA TTTTAACGGT GTATTGATGG TAGTTTCAAA TATAAGCAAG
TATAAAAACA TTATTTCCAA ACAGGAAAAA ATGTTAAAAG CCACTGCCTT GCAGGATAAG
GAAATAAGGG ATGATATATC TCGTGACAAC CAATCTCTTA AGTCTATTAT GGATAATACA
ACCGCCCAGC TGGTTTTTTT AGATAGAGAT TTCAACTTTG TTAAAGCAAA TAAAGCATAC
GTAAAAAATT GCGGACATAC GGAAGATGAA CTGATAGGTG CAAACCATTT TGTACTCTTC
CCCAGTACTG AAAACGAAGC AATTTTTAAG AGGGTAGTTA AAACCGGCAA ATCCGTGGAA
TTTCATGACA AGCCTTTTGA GTATTCTGAC CAGCCGTGGA GGGGTACTAC CTACTGGGAT
TGGAGCTTGG TGCCTATCAA AAACTCCCGT GGGAGGGTTC AAGGGCTGAT ATTTTCCTTG
TTAGAGACTA CTGTCCGCAA ACAGATGGAA TTAGCTTTGA AATTTTCACT GGAGGAAACC
CGCCGGCGTA CCCGTGAAAC GACGGCACTG CTTGAGGCGT CACGTGCCAT ACTGGAGCAT
ACCGGTTTTA CGGAAGCTGC TATGGCAGTG TATTCTTCCT GCAAGAAAAT CACCTCCTGC
CAGAGCGGTT TTGTGGGGCA TATAGAGGAT GGAGTTTGCC GTATCATTTA CCTTGATAGC
ACAAAAAATC AGCCGGAACT TCCCATGTTT GCGCCTCTTA GCGGATTGGC TTTACAGTCC
TGGTTCAGCG GAAAGCCTGT ATTGGAAAAC AACTTTGCAG CTGAAAAGGA TAATGAATTT
TATACGGCCG CTTACCCTGA TTTAAAAAAT GCTCTTTTTG CTCCGGTGCG TCTTAGCGGG
CGGAGTGTTG GCCTGATGGC TCTTTTCAAC AAGACAGGCG GGTTTGGTGT ATCCGATATC
AGGGTAGCCG CTTCTTTCAG CTCGCTTGCC GCTATCGCTT TCAGGAGCAA CCGAACCCGC
GAAATGCTGG AAGAAAGCGA AAAGCGCTAT CGCTTTTTGT TTAACAGCTT TGGTGATGCG
GTTTTTGTAT ATTACATAAC TCCAGACGGC TGCAATAGCA ATTTTGTAGA AGTTAACGAA
GTAGCCTGCA AGCGTCTCGG ATACAGCCGC CAGGAGTTGT TAAATATGTC TCCCTGCCAG
ATAGATGCCC CTGCTTCTAC CGGGGCAATG GCTGACGCCG CCAAAATGTT GAAAAAAGAA
GGTAGGGTTA TTACTGAGCA GAGGCATATA CGCCGTGATG GTACTTCTAT ACCGGTTGAA
GTTAATATTC AGCAATTTGA GTTGGGCGGA CAGCTTATGG TTATTTCGGT AGCCCGCGAT
ATCACCGAGA GGAAAAAAGC TGACGCCGCC CTGAAACTGG AGAGGGATAA GCTGCGGGGC
ATACTGGATG CTATGGAAGA CGGGGTTTAT ATTGTAAATG CTGACTATGA AATAGAGTAT
GTTAATCCGC CGCTTATGGC CCAGTTCGGG CCTATAAACG GCAAAAAATG TTATGACTAT
TTCCACAACA ACAGCAGTCC CTGCGAATAT TGCAAAAACA AAGAAGTTTT AAGCGGGCAG
ACTGTTCGCT GGGAGTGGCA TTCTCCGCAC AACCAGCGGG ATTATGAACT TATGGCTACA
CCTATTAAAA ACCCTGATGG CAGCAATTCC AAGCTGACCC TTTTCCATGA TGTTACGGAG
CGGAGCCAGA TGGAGCAGAT AATTCTGCGG TATCAGGCAG GTTTGCTGGC TCAAGCAGAG
AGGATTGCCC ATATCGGCAA TTGGGATTAT GACCTTTTAG GGCATAAACT GCTGCTGTCA
GATGAGGTCT ACAATATACT CGGTTTATCT CCTAAAAACG GTATCACGGA TTTGAAACAG
GTTATGGAAA TGATCCACCC TGATGACAGG GATATTGTAC GGTCCGAAGC CCAAAAGGCC
ATAGTTTCAG GATCGAAGAT AAATACAGAC CACCGCATAA TACGGCCTGA CGGACATTTG
CGGTATGTGC ATGAACAGGC GGAAATAACC CTGAGCGATA CAGGTATTCC CCTGCGGGTG
TTGGGTACTG TTCAGGACGT CACCGAACAA AAAATGGCTG AAGAAGCCCT GAGAGACAGC
GAAAGGCGGT ATCGTCTGCT GGCGGATAAC ATGGTGGCAT TTATCTGGAC TATTGACGAA
CATTTAAATA CCAGTTATCT TTCCCCGTCC ATTATCCGTC TGCTCAACTA TTACCCTGAG
GATATATTGG GCAAACATAT TTCCATGATA TTTACCCCCG AATCTTACGA AAAATTGCTG
GATGTATATC AGCAGGTACG CAAAACCGGG TCTGAGCTTA TTGTAAACCC GCTGGAACTG
GATGTTATGC GGCAGGACGG CAAGATAATA ATGACCGAGA CGCTTATGCG CCCGCTGTAT
GATGAAAATC ACCATTTCCT GGGTATACTG GGGGCGTCGC GTGATATAAG TGAGCGAAAG
GCTGCGGAAT ACGAATTGCA TACCCTTTCA CAGCGTTTGG TTGAGCTTCA GGAAGAAGAG
CGGTCAATTA TCGCCCGTGA ACTGCATGAC CAAGTGGGGC AATCGCTTAC GGTTTTGAAA
CTGATGCTGG ATAAAGCAAA AGATGGTCTT CCTGACAAGG CAGAGGAATT ACTGGCCGAA
GCTCAACCTC TGGTTAGTGA ACTTATAAGC AGTGTCAGAA ATATGTCACT TGATTTGCGT
CCCCGTATGC TGGATGATTT GGGTCTGCTG CCGGCTTTAC TCTGGTATTT TGACCGTTTT
ACCAGCCAGA CGGGTATAAA CGTAAATTTC CAGCATGCCG GTCTTAAACG CAAGTTTTCT
CCCCAGTTGG GCACTGCTGT ATACAGGATT ATTCAGGAAG CTCTTACAAA TGTTGTACGT
TACGCGGGGG TTGACAACGT GCTTGTGCGG GCGAAGGCGG ATAAAAACCA TCTGGCTCTG
GTTATTCAGG ATAAAGGCAA AGGCTTTAAC CCTGCCCAGC GTGCTACCGG TATGTCAAGC
GGTTTGAAGG GTATGAAAGA ACGGGTGCGT TTTCTTGGTG GTAAACTGGA TATAGAATCC
AAACCGGGTG CAGGTACACA TATTATAGTT GAACTGCCCT TGAGTGAAGA AAAGGACAGA
ATTAGCGGAG GCGAGCCATG A
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| Protein sequence | MGNIRKTNAQ LVAELEDLQC RYDKLLSNQV ALCSSERVSS GASFQILSNT CGTSSGGFVQ
ENAMDALEAC CRIAETAGEG VILTDAAGRI TLVNPRFSQI SGYPLDVLKG KSIFELAGKS
YISILLAQWE RHKKGVSSRY ELQLRKGNGR LVWVVFHVSV PFGKGNNFNG VLMVVSNISK
YKNIISKQEK MLKATALQDK EIRDDISRDN QSLKSIMDNT TAQLVFLDRD FNFVKANKAY
VKNCGHTEDE LIGANHFVLF PSTENEAIFK RVVKTGKSVE FHDKPFEYSD QPWRGTTYWD
WSLVPIKNSR GRVQGLIFSL LETTVRKQME LALKFSLEET RRRTRETTAL LEASRAILEH
TGFTEAAMAV YSSCKKITSC QSGFVGHIED GVCRIIYLDS TKNQPELPMF APLSGLALQS
WFSGKPVLEN NFAAEKDNEF YTAAYPDLKN ALFAPVRLSG RSVGLMALFN KTGGFGVSDI
RVAASFSSLA AIAFRSNRTR EMLEESEKRY RFLFNSFGDA VFVYYITPDG CNSNFVEVNE
VACKRLGYSR QELLNMSPCQ IDAPASTGAM ADAAKMLKKE GRVITEQRHI RRDGTSIPVE
VNIQQFELGG QLMVISVARD ITERKKADAA LKLERDKLRG ILDAMEDGVY IVNADYEIEY
VNPPLMAQFG PINGKKCYDY FHNNSSPCEY CKNKEVLSGQ TVRWEWHSPH NQRDYELMAT
PIKNPDGSNS KLTLFHDVTE RSQMEQIILR YQAGLLAQAE RIAHIGNWDY DLLGHKLLLS
DEVYNILGLS PKNGITDLKQ VMEMIHPDDR DIVRSEAQKA IVSGSKINTD HRIIRPDGHL
RYVHEQAEIT LSDTGIPLRV LGTVQDVTEQ KMAEEALRDS ERRYRLLADN MVAFIWTIDE
HLNTSYLSPS IIRLLNYYPE DILGKHISMI FTPESYEKLL DVYQQVRKTG SELIVNPLEL
DVMRQDGKII MTETLMRPLY DENHHFLGIL GASRDISERK AAEYELHTLS QRLVELQEEE
RSIIARELHD QVGQSLTVLK LMLDKAKDGL PDKAEELLAE AQPLVSELIS SVRNMSLDLR
PRMLDDLGLL PALLWYFDRF TSQTGINVNF QHAGLKRKFS PQLGTAVYRI IQEALTNVVR
YAGVDNVLVR AKADKNHLAL VIQDKGKGFN PAQRATGMSS GLKGMKERVR FLGGKLDIES
KPGAGTHIIV ELPLSEEKDR ISGGEP
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