| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_834 |
|---|
| Symbol | |
|---|
| ID | 8657767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 773941 |
|---|
| End bp | 774993 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003330290 |
|---|
| Protein GI | 270308232 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.245563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA ACCTTACACA GAGGATGAAC TTGATAAAAC AAGACGGGCG CGAAGTAGAA
CGTGAGAAAT TAGCCATTTT ACGGGTTTTG GCCAGCTGCC AGACACCAGT TGGCAGTAAA
ATCATTGCCC GCCGCCTGAA AAATGAATAC GGGGTTGACC TTTCGGAACG GGCAGTCCGT
TATCATCTGA TACTGCTTGA CGAAAGGAAG ATGACCTGCA AGATTAGTCG CCGTGATGGC
AGAAGCATTA CCCAACTGGG TCTTGAAGAG CTGGAAAATG CCATGGTCAC CGACAAAGTG
GGCTTCGTCA TTGACAAAAT TGAACGGCTG GCCTACATGA CCGATTTTGA TCTGGATACC
CTAAGCGGCA TGGTGCCGGT AAATATTTCT TTTTTTGCCA AAGACCAGTT TAAACCCGCT
CTTAGGTCCA TGGCACAGGC CTACAAAGCC AATTTATGCG TAAGTGATTT AGTGTGTATT
GTTCATGAGG GAGACAAGAT TTCGGATATC ACCGTTCCTG CCGGTCAGGT AGCTTTCGCT
ACTGTCTGCT CTATCGTGAT AAACGGCACT CTTCTCAAGG CCGGTATCCC CATGGATTCC
CGCTTTGGAG GTACTCTGCA GTTTCACCAG CATAAACCGT GGCGATTTAC AGACATGATT
TACTATACAG GATCTTCACT TGACCCGTCT GAAATATTTA TTGCCAGCCG AATGACCAGT
GTTTCAGAGG TAGCCCGAAG GGGTGAGGGG AAAGTTCTCT GCAATTTCCG TGAAATACCT
GCTGTAAGCC TGCCGCTGGC TGAAAAAATA ATAGCAAAGC TGAAAAATGC CGGAATAAAC
GGAGTACTTA TGATGGGAGA AGCCGGCAAA TCAGTTTGTG AAATGCCGGT AGGTTTGAAT
AAAGTCGGCA TGATAATGAT GGGCGGGCTT AATCCAGTAG CCGCAGCGGT TGAGAGCAAC
ATACCGGCTG CCAGCCATGC TATGAGCGGT TTAGTACCTT ACAGCAGTTT TACAAGCTAC
TGGGAAGCAG CAGGGATTAA GAAACCTGTT TAA
|
|---|
| Protein sequence | MNKNLTQRMN LIKQDGREVE REKLAILRVL ASCQTPVGSK IIARRLKNEY GVDLSERAVR
YHLILLDERK MTCKISRRDG RSITQLGLEE LENAMVTDKV GFVIDKIERL AYMTDFDLDT
LSGMVPVNIS FFAKDQFKPA LRSMAQAYKA NLCVSDLVCI VHEGDKISDI TVPAGQVAFA
TVCSIVINGT LLKAGIPMDS RFGGTLQFHQ HKPWRFTDMI YYTGSSLDPS EIFIASRMTS
VSEVARRGEG KVLCNFREIP AVSLPLAEKI IAKLKNAGIN GVLMMGEAGK SVCEMPVGLN
KVGMIMMGGL NPVAAAVESN IPAASHAMSG LVPYSSFTSY WEAAGIKKPV
|
|---|
| |